Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 YPR108W-AYPR108W-A 213 nt3.83□□□□□ -1.8
SPB4P25808 SPC98YNL126W 2541 nt3.83□□□□□ -1.8
SPB4P25808 GIS1YDR096W 2685 nt3.82□□□□□ -1.8
SPB4P25808 YDR186CYDR186C 2634 nt3.82□□□□□ -1.8
SPB4P25808 MIT1YEL007W 2001 nt3.82□□□□□ -1.8
SPB4P25808 YBR174CYBR174C 315 nt3.82□□□□□ -1.8
SPB4P25808 MCM10YIL150C 1716 nt3.81□□□□□ -1.8
SPB4P25808 EMC6YLL014W 327 nt3.81□□□□□ -1.8
SPB4P25808 ECM21YBL101C 3354 nt3.8□□□□□ -1.8
SPB4P25808 YGR027W-BYGR027W-B 5268 nt3.8□□□□□ -1.8
SPB4P25808 YLR227W-BYLR227W-B 5268 nt3.8□□□□□ -1.8
SPB4P25808 YPR158C-DYPR158C-D 5268 nt3.8□□□□□ -1.8
SPB4P25808 CDC53YDL132W 2448 nt3.8□□□□□ -1.8
SPB4P25808 YDR524C-AYDR524C-A 120 nt3.8□□□□□ -1.8
SPB4P25808 RPB10YOR210W 213 nt3.8□□□□□ -1.8
SPB4P25808 BMS1YPL217C 3552 nt3.79□□□□□ -1.8
SPB4P25808 snR72snR72 98 nt3.79□□□□□ -1.8
SPB4P25808 YBR277CYBR277C 402 nt3.79□□□□□ -1.8
SPB4P25808 MNL2YLR057W 2550 nt3.79□□□□□ -1.8
SPB4P25808 YKU80YMR106C 1890 nt3.79□□□□□ -1.8
SPB4P25808 MMS1YPR164W 4224 nt3.78□□□□□ -1.8
SPB4P25808 GCN1YGL195W 8019 nt3.78□□□□□ -1.8
SPB4P25808 PUT3YKL015W 2940 nt3.77□□□□□ -1.81
SPB4P25808 FUN30YAL019W 3396 nt3.77□□□□□ -1.81
SPB4P25808 tF(GAA)DtF(GAA)D 73 nt3.77□□□□□ -1.81
SPB4P25808 tF(GAA)NtF(GAA)N 73 nt3.77□□□□□ -1.81
SPB4P25808 YHR210CYHR210C 1026 nt3.77□□□□□ -1.81
SPB4P25808 MBB1YJL199C 327 nt3.77□□□□□ -1.81
SPB4P25808 RPS21AYKR057W 264 nt3.77□□□□□ -1.81
SPB4P25808 INP52YNL106C 3552 nt3.77□□□□□ -1.81
SPB4P25808 LYS14YDR034C 2373 nt3.76□□□□□ -1.81
SPB4P25808 AUS1YOR011W 4185 nt3.76□□□□□ -1.81
SPB4P25808 RPL42BYHR141C 321 nt3.76□□□□□ -1.81
SPB4P25808 YAL064W-BYAL064W-B 381 nt3.76□□□□□ -1.81
SPB4P25808 RPL42AYNL162W 321 nt3.76□□□□□ -1.81
SPB4P25808 FLO5YHR211W 3228 nt3.76□□□□□ -1.81
SPB4P25808 INP51YIL002C 2841 nt3.76□□□□□ -1.81
SPB4P25808 MGM1YOR211C 2646 nt3.75□□□□□ -1.81
SPB4P25808 YOR296WYOR296W 3870 nt3.75□□□□□ -1.81
SPB4P25808 RRP12YPL012W 3687 nt3.75□□□□□ -1.81
SPB4P25808 SMY2YBR172C 2223 nt3.75□□□□□ -1.81
SPB4P25808 HAL9YOL089C 3093 nt3.75□□□□□ -1.81
SPB4P25808 YLR154W-AYLR154W-A 186 nt3.75□□□□□ -1.81
SPB4P25808 YBL012CYBL012C 402 nt3.75□□□□□ -1.81
SPB4P25808 PSF1YDR013W 627 nt3.74□□□□□ -1.81
SPB4P25808 YHR071C-AYHR071C-A 321 nt3.74□□□□□ -1.81
SPB4P25808 RPL33BYOR234C 324 nt3.74□□□□□ -1.81
SPB4P25808 MAK21YDR060W 3078 nt3.74□□□□□ -1.81
SPB4P25808 PMP1YCR024C-A 123 nt3.73□□□□□ -1.81
SPB4P25808 YDR182W-AYDR182W-A 204 nt3.73□□□□□ -1.81
SPB4P25808 YAL042C-AYAL042C-A 378 nt3.73□□□□□ -1.81
SPB4P25808 CBF2YGR140W 2871 nt3.72□□□□□ -1.81
SPB4P25808 EMP24YGL200C 612 nt3.72□□□□□ -1.81
SPB4P25808 YJL120WYJL120W 324 nt3.72□□□□□ -1.81
SPB4P25808 RPS28BYLR264W 204 nt3.72□□□□□ -1.81
SPB4P25808 YOR072W-BYOR072W-B 162 nt3.72□□□□□ -1.81
SPB4P25808 SET2YJL168C 2202 nt3.72□□□□□ -1.81
SPB4P25808 POL3YDL102W 3294 nt3.71□□□□□ -1.81
SPB4P25808 MDN1YLR106C 14733 nt3.71□□□□□ -1.82
SPB4P25808 DBP10YDL031W 2988 nt3.71□□□□□ -1.82
SPB4P25808 SLM1YIL105C 2061 nt3.71□□□□□ -1.82
SPB4P25808 YCR043CYCR043C 384 nt3.71□□□□□ -1.82
SPB4P25808 YGR050CYGR050C 357 nt3.71□□□□□ -1.82
SPB4P25808 SNC1YAL030W 354 nt3.71□□□□□ -1.82
SPB4P25808 YLR012CYLR012C 300 nt3.71□□□□□ -1.82
SPB4P25808 SPO21YOL091W 1830 nt3.71□□□□□ -1.82
SPB4P25808 RRP6YOR001W 2202 nt3.71□□□□□ -1.82
SPB4P25808 VPS8YAL002W 3825 nt3.71□□□□□ -1.82
SPB4P25808 YLL007CYLL007C 1998 nt3.71□□□□□ -1.82
SPB4P25808 SWI5YDR146C 2130 nt3.7□□□□□ -1.82
SPB4P25808 RPL6AYML073C 531 nt3.7□□□□□ -1.82
SPB4P25808 YHR073W-AYHR073W-A 177 nt3.69□□□□□ -1.82
SPB4P25808 YIR044CYIR044C 186 nt3.69□□□□□ -1.82
SPB4P25808 MSC6YOR354C 2079 nt3.69□□□□□ -1.82
SPB4P25808 RCY1YJL204C 2523 nt3.69□□□□□ -1.82
SPB4P25808 UBP14YBR058C 2346 nt3.69□□□□□ -1.82
SPB4P25808 MDM1YML104C 3384 nt3.68□□□□□ -1.82
SPB4P25808 ELG1YOR144C 2376 nt3.68□□□□□ -1.82
SPB4P25808 SRP14YDL092W 441 nt3.67□□□□□ -1.82
SPB4P25808 HYP2YEL034W 474 nt3.67□□□□□ -1.82
SPB4P25808 ATG13YPR185W 2217 nt3.67□□□□□ -1.82
SPB4P25808 MNE1YOR350C 1992 nt3.67□□□□□ -1.82
SPB4P25808 YHR080CYHR080C 4038 nt3.67□□□□□ -1.82
SPB4P25808 RPL34BYIL052C 366 nt3.66□□□□□ -1.82
SPB4P25808 PAU8YAL068C 363 nt3.66□□□□□ -1.82
SPB4P25808 PAU18YLL064C 363 nt3.66□□□□□ -1.82
SPB4P25808 PAU6YNR076W 363 nt3.66□□□□□ -1.82
SPB4P25808 PAU20YOL161C 363 nt3.66□□□□□ -1.82
SPB4P25808 NCA2YPR155C 1851 nt3.66□□□□□ -1.82
SPB4P25808 YMR317WYMR317W 3423 nt3.66□□□□□ -1.82
SPB4P25808 STU2YLR045C 2667 nt3.65□□□□□ -1.82
SPB4P25808 YLR035C-AYLR035C-A 3468 nt3.65□□□□□ -1.83
SPB4P25808 YHL005CYHL005C 393 nt3.65□□□□□ -1.83
SPB4P25808 RPS25BYLR333C 327 nt3.65□□□□□ -1.83
SPB4P25808 YOR345CYOR345C 351 nt3.65□□□□□ -1.83
SPB4P25808 BUD4YJR092W 4344 nt3.63□□□□□ -1.83
SPB4P25808 RPN1YHR027C 2982 nt3.63□□□□□ -1.83
SPB4P25808 COY1YKL179C 2040 nt3.63□□□□□ -1.83
SPB4P25808 YER039C-AYER039C-A 219 nt3.63□□□□□ -1.83
SPB4P25808 YBR221W-AYBR221W-A 105 nt3.63□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms