Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.69■□□□□ 0.74
SNAP47Q5SQN1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 SOX15-203ENST00000570788 1093 ntBASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 AC008403.3-201ENST00000598924 454 ntBASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNAP47Q5SQN1 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.67■□□□□ 0.74
SNAP47Q5SQN1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 UNC93B4-201ENST00000505679 747 ntBASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 AP006294.2-201ENST00000641667 209 ntBASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 AC244015.2-201ENST00000616358 1861 ntBASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 AC087633.2-202ENST00000565166 1439 ntBASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.66■□□□□ 0.74
SNAP47Q5SQN1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 C2orf69P4-201ENST00000565394 541 ntBASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.65■□□□□ 0.74
SNAP47Q5SQN1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SNAP47Q5SQN1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SNAP47Q5SQN1 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.64■□□□□ 0.74
SNAP47Q5SQN1 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 PGM5P4-201ENST00000421970 445 ntBASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNAP47Q5SQN1 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms