Protein–RNA interactions for Protein: Q04603

DPB4, DNA polymerase epsilon subunit D, yeastyeast

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DPB4Q04603 tW(CCA)G2tW(CCA)G2 72 nt2.08□□□□□ -2.08
DPB4Q04603 tW(CCA)JtW(CCA)J 72 nt2.08□□□□□ -2.08
DPB4Q04603 tW(CCA)KtW(CCA)K 72 nt2.08□□□□□ -2.08
DPB4Q04603 tW(CCA)MtW(CCA)M 72 nt2.08□□□□□ -2.08
DPB4Q04603 tW(CCA)PtW(CCA)P 72 nt2.08□□□□□ -2.08
DPB4Q04603 YAL063C-AYAL063C-A 291 nt2.08□□□□□ -2.08
DPB4Q04603 BUB1YGR188C 3066 nt2.08□□□□□ -2.08
DPB4Q04603 PEP3YLR148W 2757 nt2.07□□□□□ -2.08
DPB4Q04603 RBK1YCR036W 1002 nt2.07□□□□□ -2.08
DPB4Q04603 YGR035CYGR035C 351 nt2.07□□□□□ -2.08
DPB4Q04603 YIL066W-AYIL066W-A 444 nt2.07□□□□□ -2.08
DPB4Q04603 YKR075W-AYKR075W-A 270 nt2.07□□□□□ -2.08
DPB4Q04603 SMY1YKL079W 1971 nt2.07□□□□□ -2.08
DPB4Q04603 CAT2YML042W 2013 nt2.07□□□□□ -2.08
DPB4Q04603 SVL3YPL032C 2478 nt2.06□□□□□ -2.08
DPB4Q04603 HOP2YGL033W 657 nt2.06□□□□□ -2.08
DPB4Q04603 HSK3YKL138C-A 210 nt2.06□□□□□ -2.08
DPB4Q04603 SET2YJL168C 2202 nt2.06□□□□□ -2.08
DPB4Q04603 HER1YOR227W 3741 nt2.06□□□□□ -2.08
DPB4Q04603 INO80YGL150C 4470 nt2.06□□□□□ -2.08
DPB4Q04603 MGA2YIR033W 3342 nt2.06□□□□□ -2.08
DPB4Q04603 PAN3YKL025C 2040 nt2.05□□□□□ -2.08
DPB4Q04603 PGA1YNL158W 597 nt2.05□□□□□ -2.08
DPB4Q04603 YOL019W-AYOL019W-A 153 nt2.05□□□□□ -2.08
DPB4Q04603 YPR197CYPR197C 564 nt2.05□□□□□ -2.08
DPB4Q04603 MNL2YLR057W 2550 nt2.05□□□□□ -2.08
DPB4Q04603 VPS41YDR080W 2979 nt2.05□□□□□ -2.08
DPB4Q04603 YJR003CYJR003C 1560 nt2.05□□□□□ -2.08
DPB4Q04603 YBR184WYBR184W 1572 nt2.05□□□□□ -2.08
DPB4Q04603 VMR1YHL035C 4779 nt2.05□□□□□ -2.08
DPB4Q04603 GRR1YJR090C 3456 nt2.04□□□□□ -2.08
DPB4Q04603 TOF2YKR010C 2316 nt2.04□□□□□ -2.08
DPB4Q04603 SEF1YBL066C 3447 nt2.04□□□□□ -2.08
DPB4Q04603 YOR394C-AYOR394C-A 168 nt2.04□□□□□ -2.08
DPB4Q04603 JIP5YPR169W 1479 nt2.04□□□□□ -2.08
DPB4Q04603 IRR1YIL026C 3453 nt2.04□□□□□ -2.08
DPB4Q04603 TOR2YKL203C 7425 nt2.03□□□□□ -2.08
DPB4Q04603 RSE1YML049C 4086 nt2.03□□□□□ -2.08
DPB4Q04603 YAP6YDR259C 1152 nt2.03□□□□□ -2.08
DPB4Q04603 RTR1YER139C 681 nt2.03□□□□□ -2.08
DPB4Q04603 YLR053CYLR053C 327 nt2.03□□□□□ -2.08
DPB4Q04603 TMA7YLR262C-A 195 nt2.03□□□□□ -2.08
DPB4Q04603 YML003WYML003W 873 nt2.03□□□□□ -2.08
DPB4Q04603 YNL058CYNL058C 951 nt2.03□□□□□ -2.08
DPB4Q04603 YBL083CYBL083C 426 nt2.03□□□□□ -2.08
DPB4Q04603 ZRG8YER033C 3231 nt2.02□□□□□ -2.09
DPB4Q04603 ELG1YOR144C 2376 nt2.02□□□□□ -2.09
DPB4Q04603 YOL098CYOL098C 3114 nt2.02□□□□□ -2.09
DPB4Q04603 SPP41YDR464W 4308 nt2.02□□□□□ -2.09
DPB4Q04603 TMN3YER113C 2121 nt2.02□□□□□ -2.09
DPB4Q04603 TIM13YGR181W 318 nt2.02□□□□□ -2.09
DPB4Q04603 RPS20YHL015W 366 nt2.02□□□□□ -2.09
DPB4Q04603 YIL156W-BYIL156W-B 222 nt2.02□□□□□ -2.09
DPB4Q04603 YJL020W-AYJL020W-A 258 nt2.02□□□□□ -2.09
DPB4Q04603 YBL108WYBL108W 306 nt2.02□□□□□ -2.09
DPB4Q04603 IRC20YLR247C 4671 nt2.02□□□□□ -2.09
DPB4Q04603 STE11YLR362W 2154 nt2.02□□□□□ -2.09
DPB4Q04603 SCD5YOR329C 2619 nt2.02□□□□□ -2.09
DPB4Q04603 CFT2YLR115W 2580 nt2.02□□□□□ -2.09
DPB4Q04603 NOP14YDL148C 2433 nt2.01□□□□□ -2.09
DPB4Q04603 VPS13YLL040C 9435 nt2.01□□□□□ -2.09
DPB4Q04603 AIM9YER080W 1884 nt2.01□□□□□ -2.09
DPB4Q04603 SKP2YNL311C 2292 nt2.01□□□□□ -2.09
DPB4Q04603 SNF5YBR289W 2718 nt2.01□□□□□ -2.09
DPB4Q04603 RPL26AYLR344W 384 nt2.01□□□□□ -2.09
DPB4Q04603 ISF1YMR081C 1017 nt2.01□□□□□ -2.09
DPB4Q04603 SLM1YIL105C 2061 nt2.01□□□□□ -2.09
DPB4Q04603 YMR045CYMR045C 5268 nt2.01□□□□□ -2.09
DPB4Q04603 PCF11YDR228C 1881 nt2.01□□□□□ -2.09
DPB4Q04603 DNA2YHR164C 4569 nt2□□□□□ -2.09
DPB4Q04603 YCR043CYCR043C 384 nt2□□□□□ -2.09
DPB4Q04603 snR70snR70 164 nt2□□□□□ -2.09
DPB4Q04603 YDL062WYDL062W 426 nt2□□□□□ -2.09
DPB4Q04603 RPL27BYDR471W 411 nt2□□□□□ -2.09
DPB4Q04603 RPL37BYDR500C 267 nt2□□□□□ -2.09
DPB4Q04603 RPS24AYER074W 408 nt2□□□□□ -2.09
DPB4Q04603 RPL32YBL092W 393 nt2□□□□□ -2.09
DPB4Q04603 YDR341CYDR341C 1824 nt2□□□□□ -2.09
DPB4Q04603 SYH1YPL105C 2550 nt2□□□□□ -2.09
DPB4Q04603 HCS1YKL017C 2052 nt1.99□□□□□ -2.09
DPB4Q04603 DAD4YDR320C-A 219 nt1.99□□□□□ -2.09
DPB4Q04603 RPA34YJL148W 702 nt1.99□□□□□ -2.09
DPB4Q04603 CYB5YNL111C 363 nt1.99□□□□□ -2.09
DPB4Q04603 VTC3YPL019C 2508 nt1.99□□□□□ -2.09
DPB4Q04603 YJR098CYJR098C 1971 nt1.99□□□□□ -2.09
DPB4Q04603 PDR3YBL005W 2931 nt1.99□□□□□ -2.09
DPB4Q04603 PUT3YKL015W 2940 nt1.98□□□□□ -2.09
DPB4Q04603 UBP1YDL122W 2430 nt1.98□□□□□ -2.09
DPB4Q04603 YDR008CYDR008C 351 nt1.98□□□□□ -2.09
DPB4Q04603 YPL229WYPL229W 621 nt1.98□□□□□ -2.09
DPB4Q04603 DNF1YER166W 4716 nt1.98□□□□□ -2.09
DPB4Q04603 NAM7YMR080C 2916 nt1.97□□□□□ -2.09
DPB4Q04603 RPS27AYKL156W 249 nt1.97□□□□□ -2.09
DPB4Q04603 YKL183C-AYKL183C-A 213 nt1.97□□□□□ -2.09
DPB4Q04603 YBL073WYBL073W 312 nt1.97□□□□□ -2.09
DPB4Q04603 MSB1YOR188W 3414 nt1.97□□□□□ -2.09
DPB4Q04603 ALK2YBL009W 2031 nt1.96□□□□□ -2.09
DPB4Q04603 SSD1YDR293C 3753 nt1.96□□□□□ -2.1
DPB4Q04603 PET309YLR067C 2898 nt1.96□□□□□ -2.1
DPB4Q04603 YCR087C-AYCR087C-A 462 nt1.96□□□□□ -2.1
Retrieved 100 of 7,029 protein–RNA pairs in 65.2 ms