Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC22.32■■□□□ 1.16
PMS1P54277 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PMS1P54277 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.32■■□□□ 1.16
PMS1P54277 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC22.32■■□□□ 1.16
PMS1P54277 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 AC013268.1-206ENST00000638368 961 ntBASIC22.32■■□□□ 1.16
PMS1P54277 AC112229.1-201ENST00000639295 961 ntBASIC22.32■■□□□ 1.16
PMS1P54277 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.32■■□□□ 1.16
PMS1P54277 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PMS1P54277 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC22.31■■□□□ 1.16
PMS1P54277 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PMS1P54277 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 KRT18P11-201ENST00000435214 1283 ntBASIC22.31■■□□□ 1.16
PMS1P54277 AL162430.1-201ENST00000480705 870 ntBASIC22.31■■□□□ 1.16
PMS1P54277 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.31■■□□□ 1.16
PMS1P54277 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC22.31■■□□□ 1.16
PMS1P54277 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.31■■□□□ 1.16
PMS1P54277 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC22.31■■□□□ 1.16
PMS1P54277 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PMS1P54277 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PMS1P54277 AC087633.2-202ENST00000565166 1439 ntBASIC22.31■■□□□ 1.16
PMS1P54277 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PMS1P54277 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 H19-201ENST00000411754 1788 ntTSL 5 BASIC22.3■■□□□ 1.16
PMS1P54277 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 STK25-205ENST00000405883 1904 ntTSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PMS1P54277 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 AC068338.2-201ENST00000563278 1430 ntBASIC22.3■■□□□ 1.16
PMS1P54277 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PMS1P54277 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 AC125437.2-201ENST00000625180 2167 ntBASIC22.29■■□□□ 1.16
PMS1P54277 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC22.29■■□□□ 1.16
PMS1P54277 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PMS1P54277 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
PMS1P54277 AL356652.1-201ENST00000615962 565 ntBASIC22.29■■□□□ 1.16
PMS1P54277 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.29■■□□□ 1.16
PMS1P54277 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC22.29■■□□□ 1.16
PMS1P54277 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
PMS1P54277 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.29■■□□□ 1.16
PMS1P54277 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PMS1P54277 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PMS1P54277 AL691432.2-201ENST00000607222 2038 ntBASIC22.28■■□□□ 1.16
PMS1P54277 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
PMS1P54277 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 AL162412.1-201ENST00000567129 965 ntBASIC22.28■■□□□ 1.16
PMS1P54277 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.28■■□□□ 1.16
PMS1P54277 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PMS1P54277 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.28■■□□□ 1.16
PMS1P54277 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.28■■□□□ 1.16
PMS1P54277 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.28■■□□□ 1.16
PMS1P54277 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PMS1P54277 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PMS1P54277 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMS1P54277 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PMS1P54277 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PMS1P54277 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms