Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YLR458WYLR458W 381 nt1.75□□□□□ -2.13
YNL040WP53960 ATX2YOR079C 942 nt1.75□□□□□ -2.13
YNL040WP53960 YOR333CYOR333C 417 nt1.75□□□□□ -2.13
YNL040WP53960 SIR4YDR227W 4077 nt1.75□□□□□ -2.13
YNL040WP53960 CDC53YDL132W 2448 nt1.75□□□□□ -2.13
YNL040WP53960 MET18YIL128W 3099 nt1.74□□□□□ -2.13
YNL040WP53960 IPT1YDR072C 1584 nt1.74□□□□□ -2.13
YNL040WP53960 ILM1YJR118C 612 nt1.74□□□□□ -2.13
YNL040WP53960 YJR141WYJR141W 1044 nt1.74□□□□□ -2.13
YNL040WP53960 YKR075W-AYKR075W-A 270 nt1.74□□□□□ -2.13
YNL040WP53960 TOA1YOR194C 861 nt1.74□□□□□ -2.13
YNL040WP53960 TRS20YBR254C 528 nt1.74□□□□□ -2.13
YNL040WP53960 HSH155YMR288W 2916 nt1.74□□□□□ -2.13
YNL040WP53960 MNE1YOR350C 1992 nt1.74□□□□□ -2.13
YNL040WP53960 RNH70YGR276C 1662 nt1.74□□□□□ -2.13
YNL040WP53960 BRO1YPL084W 2535 nt1.73□□□□□ -2.13
YNL040WP53960 DPB11YJL090C 2295 nt1.73□□□□□ -2.13
YNL040WP53960 STE18YJR086W 333 nt1.73□□□□□ -2.13
YNL040WP53960 AFB1YLR040C 675 nt1.73□□□□□ -2.13
YNL040WP53960 YNL010WYNL010W 726 nt1.73□□□□□ -2.13
YNL040WP53960 ATP15YPL271W 189 nt1.73□□□□□ -2.13
YNL040WP53960 YBR071WYBR071W 636 nt1.73□□□□□ -2.13
YNL040WP53960 IRA1YBR140C 9279 nt1.72□□□□□ -2.13
YNL040WP53960 YOR093CYOR093C 4947 nt1.72□□□□□ -2.13
YNL040WP53960 YLR035C-AYLR035C-A 3468 nt1.72□□□□□ -2.13
YNL040WP53960 LAG1YHL003C 1236 nt1.72□□□□□ -2.13
YNL040WP53960 CIC1YHR052W 1131 nt1.72□□□□□ -2.13
YNL040WP53960 tT(UGU)HtT(UGU)H 72 nt1.72□□□□□ -2.13
YNL040WP53960 TPM2YIL138C 486 nt1.72□□□□□ -2.13
YNL040WP53960 YJL127C-BYJL127C-B 159 nt1.72□□□□□ -2.13
YNL040WP53960 BER1YLR412W 825 nt1.72□□□□□ -2.13
YNL040WP53960 CSI1YMR025W 888 nt1.72□□□□□ -2.13
YNL040WP53960 CAT2YML042W 2013 nt1.72□□□□□ -2.13
YNL040WP53960 YJR098CYJR098C 1971 nt1.72□□□□□ -2.13
YNL040WP53960 RTT107YHR154W 3213 nt1.72□□□□□ -2.13
YNL040WP53960 VPS15YBR097W 4365 nt1.71□□□□□ -2.14
YNL040WP53960 SNU56YDR240C 1479 nt1.71□□□□□ -2.14
YNL040WP53960 YDR220CYDR220C 294 nt1.71□□□□□ -2.14
YNL040WP53960 RNR4YGR180C 1038 nt1.71□□□□□ -2.14
YNL040WP53960 TIM10YHR005C-A 282 nt1.71□□□□□ -2.14
YNL040WP53960 RPL40AYIL148W 387 nt1.71□□□□□ -2.14
YNL040WP53960 YLR031WYLR031W 561 nt1.71□□□□□ -2.14
YNL040WP53960 YML084WYML084W 309 nt1.71□□□□□ -2.14
YNL040WP53960 URA10YMR271C 684 nt1.71□□□□□ -2.14
YNL040WP53960 RPS7BYNL096C 573 nt1.71□□□□□ -2.14
YNL040WP53960 SPC72YAL047C 1869 nt1.71□□□□□ -2.14
YNL040WP53960 MGA2YIR033W 3342 nt1.71□□□□□ -2.14
YNL040WP53960 CRM1YGR218W 3255 nt1.71□□□□□ -2.14
YNL040WP53960 HNT1YDL125C 477 nt1.7□□□□□ -2.14
YNL040WP53960 GIC1YHR061C 945 nt1.7□□□□□ -2.14
YNL040WP53960 APQ13YJL075C 417 nt1.7□□□□□ -2.14
YNL040WP53960 CMS1YLR003C 876 nt1.7□□□□□ -2.14
YNL040WP53960 NAM7YMR080C 2916 nt1.7□□□□□ -2.14
YNL040WP53960 COA6YMR244C-A 315 nt1.7□□□□□ -2.14
YNL040WP53960 LSM7YNL147W 348 nt1.7□□□□□ -2.14
YNL040WP53960 PHO80YOL001W 882 nt1.7□□□□□ -2.14
YNL040WP53960 RPB5YBR154C 648 nt1.7□□□□□ -2.14
YNL040WP53960 YDR341CYDR341C 1824 nt1.7□□□□□ -2.14
YNL040WP53960 LHS1YKL073W 2646 nt1.7□□□□□ -2.14
YNL040WP53960 MZM1YDR493W 372 nt1.69□□□□□ -2.14
YNL040WP53960 YPS5YGL259W 498 nt1.69□□□□□ -2.14
YNL040WP53960 YKL044WYKL044W 321 nt1.69□□□□□ -2.14
YNL040WP53960 RPL37AYLR185W 267 nt1.69□□□□□ -2.14
YNL040WP53960 YMR247W-AYMR247W-A 144 nt1.69□□□□□ -2.14
YNL040WP53960 YOR105WYOR105W 327 nt1.69□□□□□ -2.14
YNL040WP53960 PKH3YDR466W 2697 nt1.68□□□□□ -2.14
YNL040WP53960 PHR1YOR386W 1698 nt1.68□□□□□ -2.14
YNL040WP53960 SPR3YGR059W 1539 nt1.68□□□□□ -2.14
YNL040WP53960 RTR2YDR066C 591 nt1.68□□□□□ -2.14
YNL040WP53960 YDR194W-AYDR194W-A 153 nt1.68□□□□□ -2.14
YNL040WP53960 MET32YDR253C 576 nt1.68□□□□□ -2.14
YNL040WP53960 RPL37BYDR500C 267 nt1.68□□□□□ -2.14
YNL040WP53960 Q0144Q0144 330 nt1.68□□□□□ -2.14
YNL040WP53960 NOP10YHR072W-A 177 nt1.68□□□□□ -2.14
YNL040WP53960 TIM8YJR135W-A 264 nt1.68□□□□□ -2.14
YNL040WP53960 TMA7YLR262C-A 195 nt1.68□□□□□ -2.14
YNL040WP53960 PDR8YLR266C 2106 nt1.68□□□□□ -2.14
YNL040WP53960 MDM32YOR147W 1869 nt1.68□□□□□ -2.14
YNL040WP53960 UTP13YLR222C 2454 nt1.68□□□□□ -2.14
YNL040WP53960 BFA1YJR053W 1725 nt1.68□□□□□ -2.14
YNL040WP53960 NAN1YPL126W 2691 nt1.68□□□□□ -2.14
YNL040WP53960 STB4YMR019W 2850 nt1.68□□□□□ -2.14
YNL040WP53960 MYO4YAL029C 4416 nt1.67□□□□□ -2.14
YNL040WP53960 RBK1YCR036W 1002 nt1.67□□□□□ -2.14
YNL040WP53960 BNA7YDR428C 786 nt1.67□□□□□ -2.14
YNL040WP53960 COX13YGL191W 390 nt1.67□□□□□ -2.14
YNL040WP53960 YLR053CYLR053C 327 nt1.67□□□□□ -2.14
YNL040WP53960 RPB11YOL005C 363 nt1.67□□□□□ -2.14
YNL040WP53960 YOR146WYOR146W 306 nt1.67□□□□□ -2.14
YNL040WP53960 SVS1YPL163C 783 nt1.67□□□□□ -2.14
YNL040WP53960 YPL197CYPL197C 414 nt1.67□□□□□ -2.14
YNL040WP53960 LOA1YPR139C 903 nt1.67□□□□□ -2.14
YNL040WP53960 GRR1YJR090C 3456 nt1.67□□□□□ -2.14
YNL040WP53960 SYH1YPL105C 2550 nt1.67□□□□□ -2.14
YNL040WP53960 CHC1YGL206C 4962 nt1.67□□□□□ -2.14
YNL040WP53960 TRM3YDL112W 4311 nt1.67□□□□□ -2.14
YNL040WP53960 HCS1YKL017C 2052 nt1.67□□□□□ -2.14
YNL040WP53960 SPE1YKL184W 1401 nt1.66□□□□□ -2.14
YNL040WP53960 TEN1YLR010C 483 nt1.66□□□□□ -2.14
YNL040WP53960 MMS22YLR320W 4365 nt1.66□□□□□ -2.14
Retrieved 100 of 7,029 protein–RNA pairs in 51.3 ms