Protein–RNA interactions for Protein: Q08387

DNL4, DNA ligase 4, yeastyeast

Predicted RBP Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DNL4Q08387 SPS100YHR139C 981 nt9.34□□□□□ -0.91
DNL4Q08387 IGD1YFR017C 588 nt9.32□□□□□ -0.92
DNL4Q08387 RIB1YBL033C 1038 nt9.31□□□□□ -0.92
DNL4Q08387 VPS62YGR141W 1404 nt9.31□□□□□ -0.92
DNL4Q08387 YJR114WYJR114W 393 nt9.3□□□□□ -0.92
DNL4Q08387 TAT2YOL020W 1779 nt9.29□□□□□ -0.92
DNL4Q08387 ADE8YDR408C 645 nt9.29□□□□□ -0.92
DNL4Q08387 ASP3-1YLR155C 1089 nt9.29□□□□□ -0.92
DNL4Q08387 ASP3-2YLR157C 1089 nt9.29□□□□□ -0.92
DNL4Q08387 ASP3-3YLR158C 1089 nt9.29□□□□□ -0.92
DNL4Q08387 ASP3-4YLR160C 1089 nt9.29□□□□□ -0.92
DNL4Q08387 KRE1YNL322C 942 nt9.29□□□□□ -0.92
DNL4Q08387 RRT8YOL048C 1029 nt9.29□□□□□ -0.92
DNL4Q08387 ACH1YBL015W 1581 nt9.28□□□□□ -0.92
DNL4Q08387 YFR036W-AYFR036W-A 651 nt9.27□□□□□ -0.93
DNL4Q08387 YDR455CYDR455C 309 nt9.26□□□□□ -0.93
DNL4Q08387 YIA6YIL006W 1122 nt9.26□□□□□ -0.93
DNL4Q08387 RFC1YOR217W 2586 nt9.26□□□□□ -0.93
DNL4Q08387 YMR209CYMR209C 1374 nt9.25□□□□□ -0.93
DNL4Q08387 ABZ2YMR289W 1125 nt9.25□□□□□ -0.93
DNL4Q08387 ERG13YML126C 1476 nt9.24□□□□□ -0.93
DNL4Q08387 YCP4YCR004C 744 nt9.24□□□□□ -0.93
DNL4Q08387 YDL086WYDL086W 822 nt9.24□□□□□ -0.93
DNL4Q08387 SOD2YHR008C 702 nt9.24□□□□□ -0.93
DNL4Q08387 YCR025CYCR025C 411 nt9.23□□□□□ -0.93
DNL4Q08387 YHL008CYHL008C 1884 nt9.23□□□□□ -0.93
DNL4Q08387 FRE6YLL051C 2139 nt9.22□□□□□ -0.93
DNL4Q08387 TVP23YDR084C 600 nt9.22□□□□□ -0.93
DNL4Q08387 ERG6YML008C 1152 nt9.22□□□□□ -0.93
DNL4Q08387 TOK1YJL093C 2076 nt9.22□□□□□ -0.93
DNL4Q08387 tA(AGC)DtA(AGC)D 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)FtA(AGC)F 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)GtA(AGC)G 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)HtA(AGC)H 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)JtA(AGC)J 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)K1tA(AGC)K1 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)K2tA(AGC)K2 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)LtA(AGC)L 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)M1tA(AGC)M1 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)M2tA(AGC)M2 73 nt9.21□□□□□ -0.94
DNL4Q08387 tA(AGC)PtA(AGC)P 73 nt9.21□□□□□ -0.94
DNL4Q08387 IPL1YPL209C 1104 nt9.21□□□□□ -0.94
DNL4Q08387 BSP1YPR171W 1731 nt9.2□□□□□ -0.94
DNL4Q08387 NAS2YIL007C 663 nt9.2□□□□□ -0.94
DNL4Q08387 SAM50YNL026W 1455 nt9.2□□□□□ -0.94
DNL4Q08387 HOL1YNR055C 1761 nt9.19□□□□□ -0.94
DNL4Q08387 CDD1YLR245C 429 nt9.19□□□□□ -0.94
DNL4Q08387 HXK1YFR053C 1458 nt9.19□□□□□ -0.94
DNL4Q08387 THP3YPR045C 1413 nt9.17□□□□□ -0.94
DNL4Q08387 YIL100C-AYIL100C-A 339 nt9.17□□□□□ -0.94
DNL4Q08387 SPE2YOL052C 1191 nt9.17□□□□□ -0.94
DNL4Q08387 ENO2YHR174W 1314 nt9.15□□□□□ -0.94
DNL4Q08387 FLX1YIL134W 936 nt9.15□□□□□ -0.94
DNL4Q08387 OPI3YJR073C 621 nt9.14□□□□□ -0.95
DNL4Q08387 AIM1YAL046C 357 nt9.14□□□□□ -0.95
DNL4Q08387 ALD5YER073W 1563 nt9.14□□□□□ -0.95
DNL4Q08387 FSH2YMR222C 672 nt9.13□□□□□ -0.95
DNL4Q08387 ENT4YLL038C 744 nt9.1□□□□□ -0.95
DNL4Q08387 CCT2YIL142W 1584 nt9.09□□□□□ -0.95
DNL4Q08387 ADH3YMR083W 1128 nt9.09□□□□□ -0.95
DNL4Q08387 AMF1YOR378W 1548 nt9.09□□□□□ -0.95
DNL4Q08387 POP2YNR052C 1302 nt9.08□□□□□ -0.96
DNL4Q08387 LYS20YDL182W 1287 nt9.08□□□□□ -0.96
DNL4Q08387 TPC1YGR096W 945 nt9.08□□□□□ -0.96
DNL4Q08387 YNR064CYNR064C 873 nt9.08□□□□□ -0.96
DNL4Q08387 SAC7YDR389W 1965 nt9.08□□□□□ -0.96
DNL4Q08387 SWM1YDR260C 513 nt9.07□□□□□ -0.96
DNL4Q08387 PHB2YGR231C 933 nt9.07□□□□□ -0.96
DNL4Q08387 MOB1YIL106W 945 nt9.07□□□□□ -0.96
DNL4Q08387 PCP1YGR101W 1041 nt9.06□□□□□ -0.96
DNL4Q08387 ILV3YJR016C 1758 nt9.05□□□□□ -0.96
DNL4Q08387 CYC3YAL039C 810 nt9.05□□□□□ -0.96
DNL4Q08387 YOR325WYOR325W 474 nt9.05□□□□□ -0.96
DNL4Q08387 BET2YPR176C 978 nt9.05□□□□□ -0.96
DNL4Q08387 OPI10YOL032W 741 nt9.04□□□□□ -0.96
DNL4Q08387 DIG1YPL049C 1359 nt9.03□□□□□ -0.96
DNL4Q08387 QDR2YIL121W 1629 nt9.03□□□□□ -0.96
DNL4Q08387 YER152W-AYER152W-A 567 nt9.03□□□□□ -0.96
DNL4Q08387 SER2YGR208W 930 nt9.03□□□□□ -0.96
DNL4Q08387 YLR046CYLR046C 813 nt9.03□□□□□ -0.96
DNL4Q08387 YMR007WYMR007W 381 nt9.03□□□□□ -0.96
DNL4Q08387 LEU2YCL018W 1095 nt9.03□□□□□ -0.96
DNL4Q08387 PSD1YNL169C 1503 nt9.03□□□□□ -0.96
DNL4Q08387 MTO1YGL236C 2010 nt9.03□□□□□ -0.96
DNL4Q08387 LSB6YJL100W 1824 nt9.03□□□□□ -0.96
DNL4Q08387 YKR012CYKR012C 378 nt9.01□□□□□ -0.97
DNL4Q08387 RCR1YBR005W 642 nt9□□□□□ -0.97
DNL4Q08387 HTS1YPR033C 1641 nt9□□□□□ -0.97
DNL4Q08387 NAM8YHR086W 1572 nt8.98□□□□□ -0.97
DNL4Q08387 KEL3YPL263C 1956 nt8.96□□□□□ -0.98
DNL4Q08387 ELO1YJL196C 933 nt8.96□□□□□ -0.98
DNL4Q08387 SRP102YKL154W 735 nt8.95□□□□□ -0.98
DNL4Q08387 SDS24YBR214W 1584 nt8.95□□□□□ -0.98
DNL4Q08387 ENO1YGR254W 1314 nt8.94□□□□□ -0.98
DNL4Q08387 BUD20YLR074C 501 nt8.93□□□□□ -0.98
DNL4Q08387 SWT21YNL187W 1074 nt8.93□□□□□ -0.98
DNL4Q08387 HEM14YER014W 1620 nt8.92□□□□□ -0.98
DNL4Q08387 TGA1tA(UGC)A 73 nt8.92□□□□□ -0.98
DNL4Q08387 tA(UGC)EtA(UGC)E 73 nt8.92□□□□□ -0.98
DNL4Q08387 tA(UGC)GtA(UGC)G 73 nt8.92□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 36.5 ms