Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 RBG2YGR173W 1107 nt9.53□□□□□ -0.88
VPS38Q05919 RRT8YOL048C 1029 nt9.52□□□□□ -0.89
VPS38Q05919 YMR262WYMR262W 942 nt9.51□□□□□ -0.89
VPS38Q05919 SNX3YOR357C 489 nt9.51□□□□□ -0.89
VPS38Q05919 RPC31YNL151C 756 nt9.49□□□□□ -0.89
VPS38Q05919 YNR029CYNR029C 1290 nt9.49□□□□□ -0.89
VPS38Q05919 ELO1YJL196C 933 nt9.48□□□□□ -0.89
VPS38Q05919 RIM2YBR192W 1134 nt9.47□□□□□ -0.89
VPS38Q05919 DPL1YDR294C 1770 nt9.46□□□□□ -0.9
VPS38Q05919 ADE8YDR408C 645 nt9.46□□□□□ -0.9
VPS38Q05919 YJR114WYJR114W 393 nt9.45□□□□□ -0.9
VPS38Q05919 KRR1YCL059C 951 nt9.44□□□□□ -0.9
VPS38Q05919 YNR064CYNR064C 873 nt9.44□□□□□ -0.9
VPS38Q05919 ADH1YOL086C 1047 nt9.44□□□□□ -0.9
VPS38Q05919 AGP3YFL055W 1677 nt9.44□□□□□ -0.9
VPS38Q05919 DAK2YFL053W 1776 nt9.43□□□□□ -0.9
VPS38Q05919 YMR265CYMR265C 1386 nt9.43□□□□□ -0.9
VPS38Q05919 YFR036W-AYFR036W-A 651 nt9.42□□□□□ -0.9
VPS38Q05919 OPI3YJR073C 621 nt9.41□□□□□ -0.9
VPS38Q05919 MET2YNL277W 1461 nt9.4□□□□□ -0.9
VPS38Q05919 SNZ1YMR096W 894 nt9.4□□□□□ -0.9
VPS38Q05919 SUV3YPL029W 2214 nt9.4□□□□□ -0.91
VPS38Q05919 LEU4YNL104C 1860 nt9.39□□□□□ -0.91
VPS38Q05919 HAP5YOR358W 729 nt9.39□□□□□ -0.91
VPS38Q05919 KEL3YPL263C 1956 nt9.38□□□□□ -0.91
VPS38Q05919 INH1YDL181W 258 nt9.35□□□□□ -0.91
VPS38Q05919 RPN14YGL004C 1254 nt9.35□□□□□ -0.91
VPS38Q05919 YPR126CYPR126C 309 nt9.35□□□□□ -0.91
VPS38Q05919 TVP23YDR084C 600 nt9.34□□□□□ -0.91
VPS38Q05919 SFL1YOR140W 2301 nt9.33□□□□□ -0.92
VPS38Q05919 CCT5YJR064W 1689 nt9.32□□□□□ -0.92
VPS38Q05919 NBA1YOL070C 1506 nt9.31□□□□□ -0.92
VPS38Q05919 SPS100YHR139C 981 nt9.31□□□□□ -0.92
VPS38Q05919 CRC1YOR100C 984 nt9.31□□□□□ -0.92
VPS38Q05919 YDR467CYDR467C 327 nt9.3□□□□□ -0.92
VPS38Q05919 NPP2YEL016C 1482 nt9.29□□□□□ -0.92
VPS38Q05919 IML3YBR107C 738 nt9.29□□□□□ -0.92
VPS38Q05919 MET1YKR069W 1782 nt9.29□□□□□ -0.92
VPS38Q05919 TPO4YOR273C 1980 nt9.28□□□□□ -0.92
VPS38Q05919 CTI6YPL181W 1521 nt9.28□□□□□ -0.92
VPS38Q05919 SWT21YNL187W 1074 nt9.28□□□□□ -0.92
VPS38Q05919 snR31snR31 225 nt9.28□□□□□ -0.92
VPS38Q05919 SFP1YLR403W 2052 nt9.28□□□□□ -0.92
VPS38Q05919 YRF1-2YER190W 5046 nt9.27□□□□□ -0.93
VPS38Q05919 tE(CUC)DtE(CUC)D 72 nt9.26□□□□□ -0.93
VPS38Q05919 tE(CUC)ItE(CUC)I 72 nt9.26□□□□□ -0.93
VPS38Q05919 YJL195CYJL195C 702 nt9.25□□□□□ -0.93
VPS38Q05919 ALD5YER073W 1563 nt9.24□□□□□ -0.93
VPS38Q05919 PCP1YGR101W 1041 nt9.24□□□□□ -0.93
VPS38Q05919 ABZ2YMR289W 1125 nt9.24□□□□□ -0.93
VPS38Q05919 HXK1YFR053C 1458 nt9.23□□□□□ -0.93
VPS38Q05919 KGD2YDR148C 1392 nt9.23□□□□□ -0.93
VPS38Q05919 THI72YOR192C 1800 nt9.22□□□□□ -0.93
VPS38Q05919 FET5YFL041W 1869 nt9.22□□□□□ -0.93
VPS38Q05919 YKL053WYKL053W 375 nt9.22□□□□□ -0.93
VPS38Q05919 AMF1YOR378W 1548 nt9.21□□□□□ -0.93
VPS38Q05919 GPM1YKL152C 744 nt9.21□□□□□ -0.94
VPS38Q05919 YOR072WYOR072W 315 nt9.21□□□□□ -0.94
VPS38Q05919 ENO2YHR174W 1314 nt9.21□□□□□ -0.94
VPS38Q05919 HMG2YLR450W 3138 nt9.2□□□□□ -0.94
VPS38Q05919 BSP1YPR171W 1731 nt9.18□□□□□ -0.94
VPS38Q05919 YBL095WYBL095W 813 nt9.17□□□□□ -0.94
VPS38Q05919 MHF1YOL086W-A 273 nt9.17□□□□□ -0.94
VPS38Q05919 THI3YDL080C 1830 nt9.16□□□□□ -0.94
VPS38Q05919 MTO1YGL236C 2010 nt9.15□□□□□ -0.94
VPS38Q05919 GID7YCL039W 2238 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)BtD(GUC)B 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)DtD(GUC)D 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)G1tD(GUC)G1 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)G2tD(GUC)G2 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)I1tD(GUC)I1 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)I2tD(GUC)I2 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)J1tD(GUC)J1 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)J2tD(GUC)J2 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)J3tD(GUC)J3 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)J4tD(GUC)J4 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)KtD(GUC)K 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)L1tD(GUC)L1 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)L2tD(GUC)L2 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)MtD(GUC)M 72 nt9.15□□□□□ -0.94
VPS38Q05919 tD(GUC)OtD(GUC)O 72 nt9.15□□□□□ -0.94
VPS38Q05919 TRP2YER090W 1524 nt9.15□□□□□ -0.95
VPS38Q05919 TPC1YGR096W 945 nt9.14□□□□□ -0.95
VPS38Q05919 SAN1YDR143C 1833 nt9.13□□□□□ -0.95
VPS38Q05919 FUN14YAL008W 597 nt9.13□□□□□ -0.95
VPS38Q05919 GGA2YHR108W 1758 nt9.13□□□□□ -0.95
VPS38Q05919 YEL008WYEL008W 381 nt9.12□□□□□ -0.95
VPS38Q05919 YMC2YBR104W 990 nt9.12□□□□□ -0.95
VPS38Q05919 THI6YPL214C 1623 nt9.12□□□□□ -0.95
VPS38Q05919 AAT1YKL106W 1356 nt9.12□□□□□ -0.95
VPS38Q05919 SBP1YHL034C 885 nt9.11□□□□□ -0.95
VPS38Q05919 MIM1YOL026C 342 nt9.11□□□□□ -0.95
VPS38Q05919 MEX67YPL169C 1800 nt9.1□□□□□ -0.95
VPS38Q05919 POT1YIL160C 1254 nt9.1□□□□□ -0.95
VPS38Q05919 TAF13YML098W 504 nt9.1□□□□□ -0.95
VPS38Q05919 YMR316C-BYMR316C-B 309 nt9.1□□□□□ -0.95
VPS38Q05919 LEU2YCL018W 1095 nt9.09□□□□□ -0.95
VPS38Q05919 HXT11YOL156W 1704 nt9.08□□□□□ -0.96
VPS38Q05919 EMC3YKL207W 762 nt9.08□□□□□ -0.96
VPS38Q05919 NAM8YHR086W 1572 nt9.07□□□□□ -0.96
Retrieved 100 of 7,029 protein–RNA pairs in 238.6 ms