Protein–RNA interactions for Protein: Q04053

SNX41, Sorting nexin-41, yeastyeast

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNX41Q04053 MEX67YPL169C 1800 nt8.08□□□□□ -1.12
SNX41Q04053 CPD1YGR247W 720 nt8.07□□□□□ -1.12
SNX41Q04053 GPN2YOR262W 1044 nt8.07□□□□□ -1.12
SNX41Q04053 ADH7YCR105W 1086 nt8.06□□□□□ -1.12
SNX41Q04053 SOL2YCR073W-A 948 nt8.05□□□□□ -1.12
SNX41Q04053 PAU15YIR041W 375 nt8.05□□□□□ -1.12
SNX41Q04053 FRA1YLL029W 2250 nt8.04□□□□□ -1.12
SNX41Q04053 SNZ1YMR096W 894 nt8.04□□□□□ -1.12
SNX41Q04053 TAT2YOL020W 1779 nt8.04□□□□□ -1.12
SNX41Q04053 TMA23YMR269W 636 nt8.03□□□□□ -1.12
SNX41Q04053 TPN1YGL186C 1740 nt8.03□□□□□ -1.12
SNX41Q04053 HXT10YFL011W 1641 nt8.03□□□□□ -1.12
SNX41Q04053 DAK2YFL053W 1776 nt8.02□□□□□ -1.13
SNX41Q04053 TOM71YHR117W 1920 nt8.02□□□□□ -1.13
SNX41Q04053 YPR126CYPR126C 309 nt8.01□□□□□ -1.13
SNX41Q04053 SSL2YIL143C 2532 nt8□□□□□ -1.13
SNX41Q04053 YDR455CYDR455C 309 nt7.99□□□□□ -1.13
SNX41Q04053 DDI1YER143W 1287 nt7.99□□□□□ -1.13
SNX41Q04053 LSM5YER146W 282 nt7.99□□□□□ -1.13
SNX41Q04053 QDR2YIL121W 1629 nt7.99□□□□□ -1.13
SNX41Q04053 IMO32YGR031W 1029 nt7.98□□□□□ -1.13
SNX41Q04053 ASP3-1YLR155C 1089 nt7.98□□□□□ -1.13
SNX41Q04053 ASP3-2YLR157C 1089 nt7.98□□□□□ -1.13
SNX41Q04053 ASP3-3YLR158C 1089 nt7.98□□□□□ -1.13
SNX41Q04053 ASP3-4YLR160C 1089 nt7.98□□□□□ -1.13
SNX41Q04053 GID8YMR135C 1368 nt7.97□□□□□ -1.13
SNX41Q04053 DIG1YPL049C 1359 nt7.97□□□□□ -1.13
SNX41Q04053 MRS6YOR370C 1812 nt7.96□□□□□ -1.13
SNX41Q04053 ALR1YOL130W 2580 nt7.96□□□□□ -1.13
SNX41Q04053 TAF13YML098W 504 nt7.96□□□□□ -1.14
SNX41Q04053 RSC4YKR008W 1878 nt7.96□□□□□ -1.14
SNX41Q04053 MDM35YKL053C-A 261 nt7.95□□□□□ -1.14
SNX41Q04053 AIM1YAL046C 357 nt7.95□□□□□ -1.14
SNX41Q04053 RRT8YOL048C 1029 nt7.95□□□□□ -1.14
SNX41Q04053 MHF1YOL086W-A 273 nt7.95□□□□□ -1.14
SNX41Q04053 IML3YBR107C 738 nt7.95□□□□□ -1.14
SNX41Q04053 YRF1-3YGR296W 5580 nt7.95□□□□□ -1.14
SNX41Q04053 YRF1-6YNL339C 5580 nt7.95□□□□□ -1.14
SNX41Q04053 YRF1-7YPL283C 5580 nt7.95□□□□□ -1.14
SNX41Q04053 CTI6YPL181W 1521 nt7.94□□□□□ -1.14
SNX41Q04053 SFL1YOR140W 2301 nt7.94□□□□□ -1.14
SNX41Q04053 ESS1YJR017C 513 nt7.94□□□□□ -1.14
SNX41Q04053 NBA1YOL070C 1506 nt7.93□□□□□ -1.14
SNX41Q04053 UFD1YGR048W 1086 nt7.92□□□□□ -1.14
SNX41Q04053 YKL133CYKL133C 1392 nt7.92□□□□□ -1.14
SNX41Q04053 ERG13YML126C 1476 nt7.92□□□□□ -1.14
SNX41Q04053 ENT4YLL038C 744 nt7.91□□□□□ -1.14
SNX41Q04053 NSG2YNL156C 900 nt7.91□□□□□ -1.14
SNX41Q04053 YFR036W-AYFR036W-A 651 nt7.9□□□□□ -1.14
SNX41Q04053 POT1YIL160C 1254 nt7.9□□□□□ -1.14
SNX41Q04053 YMR262WYMR262W 942 nt7.9□□□□□ -1.14
SNX41Q04053 tS(GCU)LtS(GCU)L 80 nt7.89□□□□□ -1.15
SNX41Q04053 PGC1YPL206C 966 nt7.89□□□□□ -1.15
SNX41Q04053 PAU5YFL020C 369 nt7.88□□□□□ -1.15
SNX41Q04053 SPS100YHR139C 981 nt7.88□□□□□ -1.15
SNX41Q04053 YLR046CYLR046C 813 nt7.88□□□□□ -1.15
SNX41Q04053 STP3YLR375W 1032 nt7.87□□□□□ -1.15
SNX41Q04053 AGP3YFL055W 1677 nt7.86□□□□□ -1.15
SNX41Q04053 GSF2YML048W 1212 nt7.86□□□□□ -1.15
SNX41Q04053 LPD1YFL018C 1500 nt7.86□□□□□ -1.15
SNX41Q04053 SAC7YDR389W 1965 nt7.85□□□□□ -1.15
SNX41Q04053 ADE8YDR408C 645 nt7.85□□□□□ -1.15
SNX41Q04053 YBR232CYBR232C 360 nt7.85□□□□□ -1.15
SNX41Q04053 FIT1YDR534C 1587 nt7.84□□□□□ -1.15
SNX41Q04053 YHR219WYHR219W 1875 nt7.84□□□□□ -1.15
SNX41Q04053 TVP23YDR084C 600 nt7.84□□□□□ -1.15
SNX41Q04053 YJR114WYJR114W 393 nt7.84□□□□□ -1.15
SNX41Q04053 TUB4YLR212C 1422 nt7.84□□□□□ -1.15
SNX41Q04053 tD(GUC)BtD(GUC)B 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)DtD(GUC)D 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)G1tD(GUC)G1 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)G2tD(GUC)G2 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)I1tD(GUC)I1 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)I2tD(GUC)I2 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)J1tD(GUC)J1 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)J2tD(GUC)J2 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)J3tD(GUC)J3 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)J4tD(GUC)J4 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)KtD(GUC)K 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)L1tD(GUC)L1 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)L2tD(GUC)L2 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)MtD(GUC)M 72 nt7.83□□□□□ -1.16
SNX41Q04053 tD(GUC)OtD(GUC)O 72 nt7.83□□□□□ -1.16
SNX41Q04053 NIF3YGL221C 867 nt7.83□□□□□ -1.16
SNX41Q04053 MIM1YOL026C 342 nt7.82□□□□□ -1.16
SNX41Q04053 YLR173WYLR173W 1827 nt7.81□□□□□ -1.16
SNX41Q04053 OPI3YJR073C 621 nt7.81□□□□□ -1.16
SNX41Q04053 DLD3YEL071W 1491 nt7.81□□□□□ -1.16
SNX41Q04053 APS2YJR058C 444 nt7.8□□□□□ -1.16
SNX41Q04053 CWP2YKL096W-A 279 nt7.78□□□□□ -1.16
SNX41Q04053 RTG2YGL252C 1767 nt7.78□□□□□ -1.16
SNX41Q04053 YIL177CYIL177C 5277 nt7.77□□□□□ -1.17
SNX41Q04053 SEN2YLR105C 1134 nt7.77□□□□□ -1.17
SNX41Q04053 ABZ2YMR289W 1125 nt7.77□□□□□ -1.17
SNX41Q04053 ITR2YOL103W 1830 nt7.76□□□□□ -1.17
SNX41Q04053 PAR32YDL173W 888 nt7.76□□□□□ -1.17
SNX41Q04053 YNR064CYNR064C 873 nt7.76□□□□□ -1.17
SNX41Q04053 LSR1LSR1 1175 nt7.75□□□□□ -1.17
SNX41Q04053 TIP1YBR067C 633 nt7.75□□□□□ -1.17
SNX41Q04053 HBS1YKR084C 1836 nt7.75□□□□□ -1.17
Retrieved 100 of 7,029 protein–RNA pairs in 16.1 ms