Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 ILV3YJR016C 1758 nt8.77□□□□□ -1.01
RPH1P39956 ALD5YER073W 1563 nt8.77□□□□□ -1.01
RPH1P39956 TAT2YOL020W 1779 nt8.76□□□□□ -1.01
RPH1P39956 COQ8YGL119W 1506 nt8.76□□□□□ -1.01
RPH1P39956 BSP1YPR171W 1731 nt8.74□□□□□ -1.01
RPH1P39956 YDR455CYDR455C 309 nt8.74□□□□□ -1.01
RPH1P39956 GSF2YML048W 1212 nt8.74□□□□□ -1.01
RPH1P39956 YBR232CYBR232C 360 nt8.74□□□□□ -1.01
RPH1P39956 NAP1YKR048C 1254 nt8.73□□□□□ -1.01
RPH1P39956 CYT1YOR065W 930 nt8.72□□□□□ -1.01
RPH1P39956 SPS100YHR139C 981 nt8.71□□□□□ -1.02
RPH1P39956 ESBP6YNL125C 2022 nt8.71□□□□□ -1.02
RPH1P39956 ERG13YML126C 1476 nt8.7□□□□□ -1.02
RPH1P39956 CCT2YIL142W 1584 nt8.7□□□□□ -1.02
RPH1P39956 ADE8YDR408C 645 nt8.7□□□□□ -1.02
RPH1P39956 AIM1YAL046C 357 nt8.69□□□□□ -1.02
RPH1P39956 RRT8YOL048C 1029 nt8.69□□□□□ -1.02
RPH1P39956 TUB4YLR212C 1422 nt8.69□□□□□ -1.02
RPH1P39956 ARO8YGL202W 1503 nt8.69□□□□□ -1.02
RPH1P39956 PAR32YDL173W 888 nt8.68□□□□□ -1.02
RPH1P39956 YFR036W-AYFR036W-A 651 nt8.68□□□□□ -1.02
RPH1P39956 ILV2YMR108W 2064 nt8.68□□□□□ -1.02
RPH1P39956 YJL064WYJL064W 396 nt8.67□□□□□ -1.02
RPH1P39956 DMA2YNL116W 1569 nt8.65□□□□□ -1.02
RPH1P39956 APS2YJR058C 444 nt8.65□□□□□ -1.02
RPH1P39956 YJR114WYJR114W 393 nt8.65□□□□□ -1.02
RPH1P39956 KRE1YNL322C 942 nt8.65□□□□□ -1.02
RPH1P39956 OPI10YOL032W 741 nt8.65□□□□□ -1.02
RPH1P39956 ENT4YLL038C 744 nt8.64□□□□□ -1.03
RPH1P39956 SGA1YIL099W 1650 nt8.63□□□□□ -1.03
RPH1P39956 NIF3YGL221C 867 nt8.63□□□□□ -1.03
RPH1P39956 TVP23YDR084C 600 nt8.62□□□□□ -1.03
RPH1P39956 ABZ2YMR289W 1125 nt8.62□□□□□ -1.03
RPH1P39956 BET2YPR176C 978 nt8.62□□□□□ -1.03
RPH1P39956 KES1YPL145C 1305 nt8.61□□□□□ -1.03
RPH1P39956 YLR046CYLR046C 813 nt8.61□□□□□ -1.03
RPH1P39956 PUP1YOR157C 786 nt8.61□□□□□ -1.03
RPH1P39956 DIG1YPL049C 1359 nt8.61□□□□□ -1.03
RPH1P39956 PAU19YMR325W 375 nt8.6□□□□□ -1.03
RPH1P39956 ENO2YHR174W 1314 nt8.59□□□□□ -1.03
RPH1P39956 GAL2YLR081W 1725 nt8.59□□□□□ -1.03
RPH1P39956 MTO1YGL236C 2010 nt8.59□□□□□ -1.03
RPH1P39956 QDR2YIL121W 1629 nt8.58□□□□□ -1.04
RPH1P39956 DTR1YBR180W 1719 nt8.57□□□□□ -1.04
RPH1P39956 YOR072WYOR072W 315 nt8.57□□□□□ -1.04
RPH1P39956 YHR218WYHR218W 1812 nt8.57□□□□□ -1.04
RPH1P39956 IGD1YFR017C 588 nt8.56□□□□□ -1.04
RPH1P39956 OPI3YJR073C 621 nt8.56□□□□□ -1.04
RPH1P39956 SPE2YOL052C 1191 nt8.55□□□□□ -1.04
RPH1P39956 ZAP1YJL056C 2643 nt8.54□□□□□ -1.04
RPH1P39956 TIP1YBR067C 633 nt8.54□□□□□ -1.04
RPH1P39956 LSB6YJL100W 1824 nt8.54□□□□□ -1.04
RPH1P39956 MDL2YPL270W 2322 nt8.53□□□□□ -1.04
RPH1P39956 SAC7YDR389W 1965 nt8.53□□□□□ -1.04
RPH1P39956 RFC1YOR217W 2586 nt8.53□□□□□ -1.04
RPH1P39956 YNR064CYNR064C 873 nt8.52□□□□□ -1.05
RPH1P39956 MEX67YPL169C 1800 nt8.52□□□□□ -1.05
RPH1P39956 TPC1YGR096W 945 nt8.51□□□□□ -1.05
RPH1P39956 TOK1YJL093C 2076 nt8.5□□□□□ -1.05
RPH1P39956 AMF1YOR378W 1548 nt8.5□□□□□ -1.05
RPH1P39956 SLG1YOR008C 1137 nt8.5□□□□□ -1.05
RPH1P39956 NAS2YIL007C 663 nt8.48□□□□□ -1.05
RPH1P39956 ELO1YJL196C 933 nt8.48□□□□□ -1.05
RPH1P39956 PCP1YGR101W 1041 nt8.47□□□□□ -1.05
RPH1P39956 TIM44YIL022W 1296 nt8.47□□□□□ -1.05
RPH1P39956 ODC1YPL134C 933 nt8.47□□□□□ -1.05
RPH1P39956 GID8YMR135C 1368 nt8.47□□□□□ -1.05
RPH1P39956 THP3YPR045C 1413 nt8.46□□□□□ -1.05
RPH1P39956 tA(AGC)DtA(AGC)D 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)FtA(AGC)F 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)GtA(AGC)G 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)HtA(AGC)H 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)JtA(AGC)J 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)K1tA(AGC)K1 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)K2tA(AGC)K2 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)LtA(AGC)L 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)M1tA(AGC)M1 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)M2tA(AGC)M2 73 nt8.46□□□□□ -1.06
RPH1P39956 tA(AGC)PtA(AGC)P 73 nt8.46□□□□□ -1.06
RPH1P39956 IPL1YPL209C 1104 nt8.46□□□□□ -1.06
RPH1P39956 LEU2YCL018W 1095 nt8.46□□□□□ -1.06
RPH1P39956 KEL3YPL263C 1956 nt8.46□□□□□ -1.06
RPH1P39956 YCR025CYCR025C 411 nt8.45□□□□□ -1.06
RPH1P39956 ITR2YOL103W 1830 nt8.45□□□□□ -1.06
RPH1P39956 DLD3YEL071W 1491 nt8.45□□□□□ -1.06
RPH1P39956 YKR012CYKR012C 378 nt8.42□□□□□ -1.06
RPH1P39956 FSH2YMR222C 672 nt8.42□□□□□ -1.06
RPH1P39956 YKL133CYKL133C 1392 nt8.41□□□□□ -1.06
RPH1P39956 MOB1YIL106W 945 nt8.41□□□□□ -1.06
RPH1P39956 HXT10YFL011W 1641 nt8.4□□□□□ -1.06
RPH1P39956 CDD1YLR245C 429 nt8.4□□□□□ -1.06
RPH1P39956 snR31snR31 225 nt8.4□□□□□ -1.06
RPH1P39956 NAM8YHR086W 1572 nt8.39□□□□□ -1.07
RPH1P39956 FLX1YIL134W 936 nt8.39□□□□□ -1.07
RPH1P39956 ADH3YMR083W 1128 nt8.39□□□□□ -1.07
RPH1P39956 LSR1LSR1 1175 nt8.39□□□□□ -1.07
RPH1P39956 RPN14YGL004C 1254 nt8.38□□□□□ -1.07
RPH1P39956 VMA11YPL234C 495 nt8.38□□□□□ -1.07
RPH1P39956 YHR219WYHR219W 1875 nt8.37□□□□□ -1.07
RPH1P39956 PHB2YGR231C 933 nt8.37□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms