Protein–RNA interactions for Protein: P38351

PAF1, RNA polymerase II-associated protein 1, yeastyeast

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PAF1P38351 tA(AGC)DtA(AGC)D 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)FtA(AGC)F 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)GtA(AGC)G 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)HtA(AGC)H 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)JtA(AGC)J 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)K1tA(AGC)K1 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)K2tA(AGC)K2 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)LtA(AGC)L 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)M1tA(AGC)M1 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)M2tA(AGC)M2 73 nt12.11□□□□□ -0.47
PAF1P38351 tA(AGC)PtA(AGC)P 73 nt12.11□□□□□ -0.47
PAF1P38351 NAS2YIL007C 663 nt12.11□□□□□ -0.47
PAF1P38351 AIM1YAL046C 357 nt12.11□□□□□ -0.47
PAF1P38351 IPL1YPL209C 1104 nt12.11□□□□□ -0.47
PAF1P38351 YCR025CYCR025C 411 nt12.1□□□□□ -0.47
PAF1P38351 YCP4YCR004C 744 nt12.09□□□□□ -0.47
PAF1P38351 OPI3YJR073C 621 nt12.09□□□□□ -0.47
PAF1P38351 CDD1YLR245C 429 nt12.09□□□□□ -0.47
PAF1P38351 YIA6YIL006W 1122 nt12.08□□□□□ -0.48
PAF1P38351 SPE2YOL052C 1191 nt12.08□□□□□ -0.48
PAF1P38351 ACO2YJL200C 2370 nt12.07□□□□□ -0.48
PAF1P38351 RPC82YPR190C 1965 nt12.07□□□□□ -0.48
PAF1P38351 CCT2YIL142W 1584 nt12.06□□□□□ -0.48
PAF1P38351 THP3YPR045C 1413 nt12.06□□□□□ -0.48
PAF1P38351 ENT4YLL038C 744 nt12.06□□□□□ -0.48
PAF1P38351 ENO2YHR174W 1314 nt12.06□□□□□ -0.48
PAF1P38351 SOD2YHR008C 702 nt12.04□□□□□ -0.48
PAF1P38351 HSL7YBR133C 2484 nt12.04□□□□□ -0.48
PAF1P38351 SAM50YNL026W 1455 nt12.03□□□□□ -0.48
PAF1P38351 YOR325WYOR325W 474 nt12.03□□□□□ -0.48
PAF1P38351 OPI10YOL032W 741 nt12.02□□□□□ -0.49
PAF1P38351 ILV3YJR016C 1758 nt12.02□□□□□ -0.49
PAF1P38351 ERG6YML008C 1152 nt12.01□□□□□ -0.49
PAF1P38351 FSH2YMR222C 672 nt12.01□□□□□ -0.49
PAF1P38351 SAC7YDR389W 1965 nt12.01□□□□□ -0.49
PAF1P38351 AMF1YOR378W 1548 nt12.01□□□□□ -0.49
PAF1P38351 FLX1YIL134W 936 nt12□□□□□ -0.49
PAF1P38351 TPC1YGR096W 945 nt11.99□□□□□ -0.49
PAF1P38351 BET2YPR176C 978 nt11.99□□□□□ -0.49
PAF1P38351 YLR046CYLR046C 813 nt11.98□□□□□ -0.49
PAF1P38351 YNR064CYNR064C 873 nt11.97□□□□□ -0.49
PAF1P38351 ADH3YMR083W 1128 nt11.96□□□□□ -0.49
PAF1P38351 PCP1YGR101W 1041 nt11.95□□□□□ -0.5
PAF1P38351 DIG1YPL049C 1359 nt11.94□□□□□ -0.5
PAF1P38351 PHB2YGR231C 933 nt11.94□□□□□ -0.5
PAF1P38351 LYS20YDL182W 1287 nt11.93□□□□□ -0.5
PAF1P38351 MOB1YIL106W 945 nt11.93□□□□□ -0.5
PAF1P38351 LEU2YCL018W 1095 nt11.93□□□□□ -0.5
PAF1P38351 LSB6YJL100W 1824 nt11.92□□□□□ -0.5
PAF1P38351 SPT20YOL148C 1815 nt11.92□□□□□ -0.5
PAF1P38351 CYC3YAL039C 810 nt11.89□□□□□ -0.51
PAF1P38351 YKR012CYKR012C 378 nt11.89□□□□□ -0.51
PAF1P38351 SWM1YDR260C 513 nt11.88□□□□□ -0.51
PAF1P38351 QDR2YIL121W 1629 nt11.88□□□□□ -0.51
PAF1P38351 SER2YGR208W 930 nt11.86□□□□□ -0.51
PAF1P38351 ELO1YJL196C 933 nt11.86□□□□□ -0.51
PAF1P38351 KEL3YPL263C 1956 nt11.86□□□□□ -0.51
PAF1P38351 NAM8YHR086W 1572 nt11.84□□□□□ -0.51
PAF1P38351 MUP1YGR055W 1725 nt11.83□□□□□ -0.52
PAF1P38351 YMR007WYMR007W 381 nt11.83□□□□□ -0.52
PAF1P38351 POP2YNR052C 1302 nt11.83□□□□□ -0.52
PAF1P38351 HTS1YPR033C 1641 nt11.8□□□□□ -0.52
PAF1P38351 SWT21YNL187W 1074 nt11.8□□□□□ -0.52
PAF1P38351 SDS24YBR214W 1584 nt11.79□□□□□ -0.52
PAF1P38351 ITR2YOL103W 1830 nt11.79□□□□□ -0.52
PAF1P38351 DLD3YEL071W 1491 nt11.79□□□□□ -0.52
PAF1P38351 RCR1YBR005W 642 nt11.79□□□□□ -0.52
PAF1P38351 ARO8YGL202W 1503 nt11.78□□□□□ -0.52
PAF1P38351 ENO1YGR254W 1314 nt11.78□□□□□ -0.52
PAF1P38351 YER152W-AYER152W-A 567 nt11.77□□□□□ -0.53
PAF1P38351 snR31snR31 225 nt11.76□□□□□ -0.53
PAF1P38351 SRP102YKL154W 735 nt11.75□□□□□ -0.53
PAF1P38351 SFL1YOR140W 2301 nt11.75□□□□□ -0.53
PAF1P38351 REX2YLR059C 810 nt11.74□□□□□ -0.53
PAF1P38351 MET1YKR069W 1782 nt11.73□□□□□ -0.53
PAF1P38351 YMR265CYMR265C 1386 nt11.72□□□□□ -0.53
PAF1P38351 KES1YPL145C 1305 nt11.72□□□□□ -0.53
PAF1P38351 HAP5YOR358W 729 nt11.72□□□□□ -0.53
PAF1P38351 SUV3YPL029W 2214 nt11.71□□□□□ -0.53
PAF1P38351 VBA3YCL069W 1377 nt11.71□□□□□ -0.53
PAF1P38351 GID8YMR135C 1368 nt11.71□□□□□ -0.53
PAF1P38351 YLR280CYLR280C 351 nt11.71□□□□□ -0.53
PAF1P38351 HEL2YDR266C 1920 nt11.7□□□□□ -0.54
PAF1P38351 TGA1tA(UGC)A 73 nt11.7□□□□□ -0.54
PAF1P38351 tA(UGC)EtA(UGC)E 73 nt11.7□□□□□ -0.54
PAF1P38351 tA(UGC)GtA(UGC)G 73 nt11.7□□□□□ -0.54
PAF1P38351 tA(UGC)LtA(UGC)L 73 nt11.7□□□□□ -0.54
PAF1P38351 tA(UGC)OtA(UGC)O 73 nt11.7□□□□□ -0.54
PAF1P38351 RPN14YGL004C 1254 nt11.7□□□□□ -0.54
PAF1P38351 YKL053WYKL053W 375 nt11.7□□□□□ -0.54
PAF1P38351 VMA11YPL234C 495 nt11.7□□□□□ -0.54
PAF1P38351 ERO1YML130C 1692 nt11.7□□□□□ -0.54
PAF1P38351 COQ8YGL119W 1506 nt11.7□□□□□ -0.54
PAF1P38351 YGR210CYGR210C 1236 nt11.69□□□□□ -0.54
PAF1P38351 SRP54YPR088C 1626 nt11.68□□□□□ -0.54
PAF1P38351 FCY1YPR062W 477 nt11.66□□□□□ -0.54
PAF1P38351 BUD20YLR074C 501 nt11.65□□□□□ -0.54
PAF1P38351 LSR1LSR1 1175 nt11.65□□□□□ -0.54
PAF1P38351 CRC1YOR100C 984 nt11.65□□□□□ -0.54
PAF1P38351 YHR219WYHR219W 1875 nt11.65□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms