Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 STP3YLR375W 1032 nt9.23□□□□□ -0.93
RAD3P06839 HEM13YDR044W 987 nt9.22□□□□□ -0.93
RAD3P06839 SEC61YLR378C 1443 nt9.22□□□□□ -0.93
RAD3P06839 OXA1YER154W 1209 nt9.21□□□□□ -0.94
RAD3P06839 FRE6YLL051C 2139 nt9.21□□□□□ -0.94
RAD3P06839 YKL133CYKL133C 1392 nt9.21□□□□□ -0.94
RAD3P06839 FIT1YDR534C 1587 nt9.19□□□□□ -0.94
RAD3P06839 MIM1YOL026C 342 nt9.17□□□□□ -0.94
RAD3P06839 YHR219WYHR219W 1875 nt9.17□□□□□ -0.94
RAD3P06839 AGP3YFL055W 1677 nt9.16□□□□□ -0.94
RAD3P06839 BNI5YNL166C 1347 nt9.16□□□□□ -0.94
RAD3P06839 PAU5YFL020C 369 nt9.16□□□□□ -0.94
RAD3P06839 CSM1YCR086W 573 nt9.15□□□□□ -0.94
RAD3P06839 YJL055WYJL055W 738 nt9.15□□□□□ -0.94
RAD3P06839 tD(GUC)BtD(GUC)B 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)DtD(GUC)D 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)G1tD(GUC)G1 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)G2tD(GUC)G2 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)I1tD(GUC)I1 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)I2tD(GUC)I2 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)J1tD(GUC)J1 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)J2tD(GUC)J2 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)J3tD(GUC)J3 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)J4tD(GUC)J4 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)KtD(GUC)K 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)L1tD(GUC)L1 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)L2tD(GUC)L2 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)MtD(GUC)M 72 nt9.14□□□□□ -0.95
RAD3P06839 tD(GUC)OtD(GUC)O 72 nt9.14□□□□□ -0.95
RAD3P06839 YER188WYER188W 720 nt9.14□□□□□ -0.95
RAD3P06839 TOM71YHR117W 1920 nt9.13□□□□□ -0.95
RAD3P06839 LSR1LSR1 1175 nt9.13□□□□□ -0.95
RAD3P06839 FUB1YCR076C 753 nt9.12□□□□□ -0.95
RAD3P06839 PAU19YMR325W 375 nt9.12□□□□□ -0.95
RAD3P06839 MSC1YML128C 1542 nt9.11□□□□□ -0.95
RAD3P06839 YJL064WYJL064W 396 nt9.11□□□□□ -0.95
RAD3P06839 GAL3YDR009W 1563 nt9.09□□□□□ -0.95
RAD3P06839 YJL118WYJL118W 660 nt9.09□□□□□ -0.95
RAD3P06839 AIM1YAL046C 357 nt9.09□□□□□ -0.95
RAD3P06839 TAF13YML098W 504 nt9.09□□□□□ -0.95
RAD3P06839 TAT2YOL020W 1779 nt9.09□□□□□ -0.95
RAD3P06839 DLD3YEL071W 1491 nt9.08□□□□□ -0.96
RAD3P06839 OSH7YHR001W 1314 nt9.07□□□□□ -0.96
RAD3P06839 TIM44YIL022W 1296 nt9.07□□□□□ -0.96
RAD3P06839 RIB7YBR153W 735 nt9.07□□□□□ -0.96
RAD3P06839 ALR1YOL130W 2580 nt9.07□□□□□ -0.96
RAD3P06839 CWP2YKL096W-A 279 nt9.06□□□□□ -0.96
RAD3P06839 HBS1YKR084C 1836 nt9.05□□□□□ -0.96
RAD3P06839 RPT5YOR117W 1305 nt9.05□□□□□ -0.96
RAD3P06839 SAM3YPL274W 1764 nt9.04□□□□□ -0.96
RAD3P06839 PAR32YDL173W 888 nt9.03□□□□□ -0.96
RAD3P06839 YLR046CYLR046C 813 nt9.03□□□□□ -0.96
RAD3P06839 MHF1YOL086W-A 273 nt9.02□□□□□ -0.97
RAD3P06839 DUS3YLR401C 2007 nt9.02□□□□□ -0.97
RAD3P06839 NUC1YJL208C 990 nt9.01□□□□□ -0.97
RAD3P06839 MET30YIL046W 1923 nt9□□□□□ -0.97
RAD3P06839 SOL2YCR073W-A 948 nt9□□□□□ -0.97
RAD3P06839 RPD3YNL330C 1302 nt9□□□□□ -0.97
RAD3P06839 SFL1YOR140W 2301 nt8.99□□□□□ -0.97
RAD3P06839 ITR2YOL103W 1830 nt8.99□□□□□ -0.97
RAD3P06839 LSM5YER146W 282 nt8.99□□□□□ -0.97
RAD3P06839 GSF2YML048W 1212 nt8.99□□□□□ -0.97
RAD3P06839 SNZ1YMR096W 894 nt8.99□□□□□ -0.97
RAD3P06839 RAS2YNL098C 969 nt8.99□□□□□ -0.97
RAD3P06839 YPR126CYPR126C 309 nt8.99□□□□□ -0.97
RAD3P06839 DUR3YHL016C 2208 nt8.99□□□□□ -0.97
RAD3P06839 ENT4YLL038C 744 nt8.98□□□□□ -0.97
RAD3P06839 YMR262WYMR262W 942 nt8.98□□□□□ -0.97
RAD3P06839 FET5YFL041W 1869 nt8.97□□□□□ -0.97
RAD3P06839 BSP1YPR171W 1731 nt8.97□□□□□ -0.97
RAD3P06839 YDR455CYDR455C 309 nt8.96□□□□□ -0.98
RAD3P06839 ASP3-1YLR155C 1089 nt8.96□□□□□ -0.98
RAD3P06839 ASP3-2YLR157C 1089 nt8.96□□□□□ -0.98
RAD3P06839 ASP3-3YLR158C 1089 nt8.96□□□□□ -0.98
RAD3P06839 ASP3-4YLR160C 1089 nt8.96□□□□□ -0.98
RAD3P06839 SLG1YOR008C 1137 nt8.96□□□□□ -0.98
RAD3P06839 TUB4YLR212C 1422 nt8.96□□□□□ -0.98
RAD3P06839 POT1YIL160C 1254 nt8.95□□□□□ -0.98
RAD3P06839 YJR114WYJR114W 393 nt8.95□□□□□ -0.98
RAD3P06839 POP2YNR052C 1302 nt8.95□□□□□ -0.98
RAD3P06839 YNL190WYNL190W 615 nt8.93□□□□□ -0.98
RAD3P06839 VMA11YPL234C 495 nt8.92□□□□□ -0.98
RAD3P06839 RIB1YBL033C 1038 nt8.91□□□□□ -0.98
RAD3P06839 YRF1-2YER190W 5046 nt8.9□□□□□ -0.98
RAD3P06839 INH1YDL181W 258 nt8.9□□□□□ -0.98
RAD3P06839 EAF3YPR023C 1206 nt8.9□□□□□ -0.98
RAD3P06839 IML3YBR107C 738 nt8.9□□□□□ -0.98
RAD3P06839 snR4snR4 186 nt8.9□□□□□ -0.98
RAD3P06839 FRA1YLL029W 2250 nt8.89□□□□□ -0.99
RAD3P06839 OYE2YHR179W 1203 nt8.89□□□□□ -0.99
RAD3P06839 RPC31YNL151C 756 nt8.89□□□□□ -0.99
RAD3P06839 ORT1YOR130C 879 nt8.89□□□□□ -0.99
RAD3P06839 RIM2YBR192W 1134 nt8.89□□□□□ -0.99
RAD3P06839 CTI6YPL181W 1521 nt8.89□□□□□ -0.99
RAD3P06839 TIP1YBR067C 633 nt8.88□□□□□ -0.99
RAD3P06839 DPL1YDR294C 1770 nt8.88□□□□□ -0.99
RAD3P06839 TPS1YBR126C 1488 nt8.88□□□□□ -0.99
RAD3P06839 ADE16YLR028C 1776 nt8.86□□□□□ -0.99
RAD3P06839 SAC7YDR389W 1965 nt8.86□□□□□ -0.99
RAD3P06839 LAS17YOR181W 1902 nt8.86□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 15 ms