Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 RARRES2P1-201ENST00000474487 481 ntBASIC17.67■□□□□ 0.42
BEST4Q8NFU0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 AL356740.2-201ENST00000601559 647 ntBASIC17.67■□□□□ 0.42
BEST4Q8NFU0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
BEST4Q8NFU0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 AP006587.3-201ENST00000525742 1516 ntBASIC17.66■□□□□ 0.42
BEST4Q8NFU0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 AC138932.1-201ENST00000534164 6830 ntBASIC17.66■□□□□ 0.42
BEST4Q8NFU0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BEST4Q8NFU0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 AC099778.1-201ENST00000568593 1911 ntBASIC17.65■□□□□ 0.42
BEST4Q8NFU0 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
BEST4Q8NFU0 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST4Q8NFU0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST4Q8NFU0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
BEST4Q8NFU0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST4Q8NFU0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
BEST4Q8NFU0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
BEST4Q8NFU0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 AL162377.1-201ENST00000618844 1793 ntBASIC17.64■□□□□ 0.41
BEST4Q8NFU0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 SRD5A1P1-201ENST00000442297 786 ntBASIC17.64■□□□□ 0.41
BEST4Q8NFU0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.64■□□□□ 0.41
BEST4Q8NFU0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BEST4Q8NFU0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms