Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 YER188C-AYER188C-A 300 nt3.83□□□□□ -1.8
PUF3Q07807 CDC26YFR036W 375 nt3.83□□□□□ -1.8
PUF3Q07807 YGL052WYGL052W 306 nt3.83□□□□□ -1.8
PUF3Q07807 YIL032CYIL032C 357 nt3.83□□□□□ -1.8
PUF3Q07807 YMR141W-AYMR141W-A 225 nt3.83□□□□□ -1.8
PUF3Q07807 EGD1YPL037C 474 nt3.83□□□□□ -1.8
PUF3Q07807 YBR137WYBR137W 540 nt3.83□□□□□ -1.8
PUF3Q07807 SPP382YLR424W 2127 nt3.83□□□□□ -1.8
PUF3Q07807 PRK1YIL095W 2433 nt3.83□□□□□ -1.8
PUF3Q07807 REB1YBR049C 2433 nt3.83□□□□□ -1.8
PUF3Q07807 FUN12YAL035W 3009 nt3.83□□□□□ -1.8
PUF3Q07807 ISM1YPL040C 3009 nt3.83□□□□□ -1.8 RIP-Chip
PUF3Q07807 RAD26YJR035W 3258 nt3.82□□□□□ -1.8
PUF3Q07807 PIN4YBL051C 2007 nt3.82□□□□□ -1.8
PUF3Q07807 TDA1YMR291W 1761 nt3.82□□□□□ -1.8 RIP-Chip
PUF3Q07807 PHM6YDR281C 315 nt3.82□□□□□ -1.8
PUF3Q07807 YEL075CYEL075C 369 nt3.82□□□□□ -1.8
PUF3Q07807 YER091C-AYER091C-A 222 nt3.82□□□□□ -1.8
PUF3Q07807 YKL111CYKL111C 336 nt3.82□□□□□ -1.8
PUF3Q07807 COX19YLL018C-A 297 nt3.82□□□□□ -1.8
PUF3Q07807 YOR302WYOR302W 78 nt3.82□□□□□ -1.8
PUF3Q07807 MGR1YCL044C 1254 nt3.82□□□□□ -1.8
PUF3Q07807 SSM4YIL030C 3960 nt3.82□□□□□ -1.8
PUF3Q07807 MYO3YKL129C 3819 nt3.82□□□□□ -1.8
PUF3Q07807 RPS26BYER131W 360 nt3.81□□□□□ -1.8
PUF3Q07807 AYR1YIL124W 894 nt3.81□□□□□ -1.8
PUF3Q07807 YBL083CYBL083C 426 nt3.81□□□□□ -1.8
PUF3Q07807 RPB11YOL005C 363 nt3.81□□□□□ -1.8
PUF3Q07807 YBR197CYBR197C 654 nt3.81□□□□□ -1.8
PUF3Q07807 ELM1YKL048C 1923 nt3.81□□□□□ -1.8
PUF3Q07807 VIK1YPL253C 1944 nt3.81□□□□□ -1.8
PUF3Q07807 GPI1YGR216C 1830 nt3.81□□□□□ -1.8 RIP-Chip
PUF3Q07807 SHQ1YIL104C 1524 nt3.8□□□□□ -1.8
PUF3Q07807 ATP22YDR350C 2055 nt3.8□□□□□ -1.8
PUF3Q07807 RPL29YFR032C-A 180 nt3.8□□□□□ -1.8
PUF3Q07807 RPS0AYGR214W 759 nt3.8□□□□□ -1.8
PUF3Q07807 COF1YLL050C 432 nt3.8□□□□□ -1.8
PUF3Q07807 RPL37AYLR185W 267 nt3.8□□□□□ -1.8
PUF3Q07807 PBS2YJL128C 2007 nt3.8□□□□□ -1.8
PUF3Q07807 MIP6YHR015W 1980 nt3.8□□□□□ -1.8
PUF3Q07807 SPT10YJL127C 1923 nt3.8□□□□□ -1.8
PUF3Q07807 RPS29BYDL061C 171 nt3.79□□□□□ -1.8
PUF3Q07807 GPG1YGL121C 381 nt3.79□□□□□ -1.8
PUF3Q07807 YJR140W-AYJR140W-A 150 nt3.79□□□□□ -1.8
PUF3Q07807 MSD1YPL104W 1977 nt3.79□□□□□ -1.8 RIP-Chip
PUF3Q07807 DAN4YJR151C 3486 nt3.79□□□□□ -1.8
PUF3Q07807 SGO1YOR073W 1773 nt3.79□□□□□ -1.8
PUF3Q07807 DBP6YNR038W 1890 nt3.78□□□□□ -1.8
PUF3Q07807 YJR023CYJR023C 402 nt3.78□□□□□ -1.8
PUF3Q07807 TMA19YKL056C 504 nt3.78□□□□□ -1.8
PUF3Q07807 RRN6YBL014C 2685 nt3.78□□□□□ -1.8
PUF3Q07807 SSP1YHR184W 1716 nt3.78□□□□□ -1.8
PUF3Q07807 MSH4YFL003C 2637 nt3.77□□□□□ -1.81
PUF3Q07807 YBR259WYBR259W 2067 nt3.77□□□□□ -1.81
PUF3Q07807 OSH3YHR073W 2991 nt3.77□□□□□ -1.81
PUF3Q07807 CAF130YGR134W 3369 nt3.77□□□□□ -1.81
PUF3Q07807 YDR048CYDR048C 315 nt3.77□□□□□ -1.81
PUF3Q07807 CSN9YDR179C 489 nt3.77□□□□□ -1.81
PUF3Q07807 DAD4YDR320C-A 219 nt3.77□□□□□ -1.81
PUF3Q07807 STE14YDR410C 720 nt3.77□□□□□ -1.81
PUF3Q07807 MF(ALPHA)1YPL187W 498 nt3.77□□□□□ -1.81
PUF3Q07807 MDM32YOR147W 1869 nt3.77□□□□□ -1.81
PUF3Q07807 HTA1YDR225W 399 nt3.76□□□□□ -1.81
PUF3Q07807 FRQ1YDR373W 573 nt3.76□□□□□ -1.81
PUF3Q07807 YEL014CYEL014C 306 nt3.76□□□□□ -1.81
PUF3Q07807 YJR112W-AYJR112W-A 330 nt3.76□□□□□ -1.81
PUF3Q07807 LTP1YPR073C 486 nt3.76□□□□□ -1.81
PUF3Q07807 URA2YJL130C 6645 nt3.76□□□□□ -1.81
PUF3Q07807 DPB11YJL090C 2295 nt3.75□□□□□ -1.81
PUF3Q07807 DNM1YLL001W 2274 nt3.75□□□□□ -1.81
PUF3Q07807 YHR078WYHR078W 1659 nt3.75□□□□□ -1.81
PUF3Q07807 COG8YML071C 1824 nt3.75□□□□□ -1.81
PUF3Q07807 SRP68YPL243W 1800 nt3.75□□□□□ -1.81
PUF3Q07807 ARF1YDL192W 546 nt3.75□□□□□ -1.81
PUF3Q07807 YDR250CYDR250C 276 nt3.75□□□□□ -1.81
PUF3Q07807 YLR140WYLR140W 327 nt3.75□□□□□ -1.81
PUF3Q07807 RPS22BYLR367W 393 nt3.75□□□□□ -1.81
PUF3Q07807 YBL109WYBL109W 336 nt3.75□□□□□ -1.81
PUF3Q07807 YOR072W-AYOR072W-A 249 nt3.75□□□□□ -1.81
PUF3Q07807 EBS1YDR206W 2655 nt3.75□□□□□ -1.81
PUF3Q07807 YDR061WYDR061W 1620 nt3.74□□□□□ -1.81
PUF3Q07807 MZM1YDR493W 372 nt3.74□□□□□ -1.81 RIP-Chip
PUF3Q07807 RPL14BYHL001W 417 nt3.74□□□□□ -1.81
PUF3Q07807 YIL102CYIL102C 306 nt3.74□□□□□ -1.81
PUF3Q07807 SLM2YNL047C 1971 nt3.74□□□□□ -1.81
PUF3Q07807 ABP140YOR239W 1887 nt3.73□□□□□ -1.81
PUF3Q07807 SYT1YPR095C 3681 nt3.73□□□□□ -1.81
PUF3Q07807 GSC2YGR032W 5688 nt3.73□□□□□ -1.81
PUF3Q07807 PEX5YDR244W 1839 nt3.73□□□□□ -1.81
PUF3Q07807 RLF2YPR018W 1821 nt3.73□□□□□ -1.81
PUF3Q07807 SPT16YGL207W 3108 nt3.73□□□□□ -1.81
PUF3Q07807 BFA1YJR053W 1725 nt3.73□□□□□ -1.81
PUF3Q07807 YDL011CYDL011C 324 nt3.72□□□□□ -1.81
PUF3Q07807 YHL042WYHL042W 453 nt3.72□□□□□ -1.81
PUF3Q07807 POG1YIL122W 1056 nt3.72□□□□□ -1.81
PUF3Q07807 HTB2YBL002W 396 nt3.72□□□□□ -1.81
PUF3Q07807 RPL36BYPL249C-A 303 nt3.72□□□□□ -1.81
PUF3Q07807 MES1YGR264C 2256 nt3.72□□□□□ -1.81
PUF3Q07807 YGL140CYGL140C 3660 nt3.71□□□□□ -1.82
PUF3Q07807 COX1Q0045 1605 nt3.71□□□□□ -1.82
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms