Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 RNP1YLL046C 750 nt2.5□□□□□ -2.01
VTA1Q06263 PSO2YMR137C 1986 nt2.5□□□□□ -2.01
VTA1Q06263 PSD2YGR170W 3417 nt2.5□□□□□ -2.01
VTA1Q06263 CAF120YNL278W 3183 nt2.5□□□□□ -2.01
VTA1Q06263 BI4Q0120 1917 nt2.5□□□□□ -2.01
VTA1Q06263 TOR1YJR066W 7413 nt2.5□□□□□ -2.01
VTA1Q06263 SSF2YDR312W 1362 nt2.49□□□□□ -2.01
VTA1Q06263 YOR343W-AYOR343W-A 1317 nt2.49□□□□□ -2.01
VTA1Q06263 YCR108CYCR108C 192 nt2.49□□□□□ -2.01
VTA1Q06263 TSA2YDR453C 591 nt2.49□□□□□ -2.01
VTA1Q06263 YER038W-AYER038W-A 381 nt2.49□□□□□ -2.01
VTA1Q06263 RPL29YFR032C-A 180 nt2.49□□□□□ -2.01
VTA1Q06263 YGL015CYGL015C 393 nt2.49□□□□□ -2.01
VTA1Q06263 PRM8YGL053W 714 nt2.49□□□□□ -2.01
VTA1Q06263 RAD6YGL058W 519 nt2.49□□□□□ -2.01
VTA1Q06263 YGR050CYGR050C 357 nt2.49□□□□□ -2.01
VTA1Q06263 GIC1YHR061C 945 nt2.49□□□□□ -2.01
VTA1Q06263 YJL202CYJL202C 348 nt2.49□□□□□ -2.01
VTA1Q06263 YAL026C-AYAL026C-A 438 nt2.49□□□□□ -2.01
VTA1Q06263 EMC6YLL014W 327 nt2.49□□□□□ -2.01
VTA1Q06263 ARV1YLR242C 966 nt2.49□□□□□ -2.01
VTA1Q06263 YHC1YLR298C 696 nt2.49□□□□□ -2.01
VTA1Q06263 ALG14YBR070C 714 nt2.49□□□□□ -2.01
VTA1Q06263 AMS1YGL156W 3252 nt2.49□□□□□ -2.01
VTA1Q06263 IKI3YLR384C 4050 nt2.49□□□□□ -2.01
VTA1Q06263 RTT10YPL183C 3042 nt2.49□□□□□ -2.01
VTA1Q06263 YDR239CYDR239C 2364 nt2.49□□□□□ -2.01
VTA1Q06263 YER079C-AYER079C-A 339 nt2.48□□□□□ -2.01
VTA1Q06263 YGL165CYGL165C 579 nt2.48□□□□□ -2.01
VTA1Q06263 BER1YLR412W 825 nt2.48□□□□□ -2.01
VTA1Q06263 RPL25YOL127W 429 nt2.48□□□□□ -2.01
VTA1Q06263 YOR050CYOR050C 348 nt2.48□□□□□ -2.01
VTA1Q06263 Q0017Q0017 162 nt2.48□□□□□ -2.01
VTA1Q06263 ESL2YKR096W 3588 nt2.48□□□□□ -2.01
VTA1Q06263 RGA2YDR379W 3030 nt2.48□□□□□ -2.01
VTA1Q06263 PDR1YGL013C 3207 nt2.47□□□□□ -2.01
VTA1Q06263 ECM5YMR176W 4236 nt2.47□□□□□ -2.01
VTA1Q06263 APQ13YJL075C 417 nt2.47□□□□□ -2.01
VTA1Q06263 AFB1YLR040C 675 nt2.47□□□□□ -2.01
VTA1Q06263 CRS5YOR031W 210 nt2.47□□□□□ -2.01
VTA1Q06263 YPR145C-AYPR145C-A 237 nt2.47□□□□□ -2.01
VTA1Q06263 snR43snR43 209 nt2.47□□□□□ -2.01
VTA1Q06263 HRD3YLR207W 2502 nt2.47□□□□□ -2.01
VTA1Q06263 BAS1YKR099W 2436 nt2.46□□□□□ -2.02
VTA1Q06263 YNL146C-AYNL146C-A 195 nt2.46□□□□□ -2.02
VTA1Q06263 YBR197CYBR197C 654 nt2.46□□□□□ -2.02
VTA1Q06263 MRD1YPR112C 2664 nt2.46□□□□□ -2.02
VTA1Q06263 ASG1YIL130W 2895 nt2.45□□□□□ -2.02
VTA1Q06263 ECM25YJL201W 1800 nt2.45□□□□□ -2.02
VTA1Q06263 SSE1YPL106C 2082 nt2.45□□□□□ -2.02
VTA1Q06263 INP51YIL002C 2841 nt2.45□□□□□ -2.02
VTA1Q06263 SPO13YHR014W 876 nt2.45□□□□□ -2.02
VTA1Q06263 YJR023CYJR023C 402 nt2.45□□□□□ -2.02
VTA1Q06263 RPL36BYPL249C-A 303 nt2.45□□□□□ -2.02
VTA1Q06263 TOP2YNL088W 4287 nt2.45□□□□□ -2.02
VTA1Q06263 LEU3YLR451W 2661 nt2.45□□□□□ -2.02
VTA1Q06263 SPR3YGR059W 1539 nt2.44□□□□□ -2.02
VTA1Q06263 MLH1YMR167W 2310 nt2.44□□□□□ -2.02
VTA1Q06263 YER119C-AYER119C-A 372 nt2.44□□□□□ -2.02
VTA1Q06263 CIC1YHR052W 1131 nt2.44□□□□□ -2.02
VTA1Q06263 KTI11YBL071W-A 249 nt2.44□□□□□ -2.02
VTA1Q06263 ACM1YPL267W 630 nt2.44□□□□□ -2.02
VTA1Q06263 HOS4YIL112W 3252 nt2.44□□□□□ -2.02
VTA1Q06263 NDD1YOR372C 1665 nt2.44□□□□□ -2.02
VTA1Q06263 PHR1YOR386W 1698 nt2.44□□□□□ -2.02
VTA1Q06263 ARP8YOR141C 2646 nt2.43□□□□□ -2.02
VTA1Q06263 PRP6YBR055C 2700 nt2.43□□□□□ -2.02
VTA1Q06263 YPR089WYPR089W 2667 nt2.43□□□□□ -2.02
VTA1Q06263 YDR250CYDR250C 276 nt2.43□□□□□ -2.02
VTA1Q06263 ACB1YGR037C 264 nt2.43□□□□□ -2.02
VTA1Q06263 PEP8YJL053W 1140 nt2.43□□□□□ -2.02
VTA1Q06263 YDR186CYDR186C 2634 nt2.43□□□□□ -2.02
VTA1Q06263 SGM1YJR134C 2124 nt2.42□□□□□ -2.02
VTA1Q06263 SPF1YEL031W 3648 nt2.42□□□□□ -2.02
VTA1Q06263 MET32YDR253C 576 nt2.42□□□□□ -2.02
VTA1Q06263 GPI8YDR331W 1236 nt2.42□□□□□ -2.02
VTA1Q06263 HYR1YIR037W 492 nt2.42□□□□□ -2.02
VTA1Q06263 VPS51YKR020W 495 nt2.42□□□□□ -2.02
VTA1Q06263 PHO80YOL001W 882 nt2.42□□□□□ -2.02
VTA1Q06263 YPL080CYPL080C 327 nt2.42□□□□□ -2.02
VTA1Q06263 FAR11YNL127W 2862 nt2.42□□□□□ -2.02
VTA1Q06263 ISW1YBR245C 3390 nt2.41□□□□□ -2.02
VTA1Q06263 SNU56YDR240C 1479 nt2.41□□□□□ -2.02
VTA1Q06263 YNL018CYNL018C 1839 nt2.41□□□□□ -2.02
VTA1Q06263 LAG1YHL003C 1236 nt2.41□□□□□ -2.02
VTA1Q06263 YIL058WYIL058W 285 nt2.41□□□□□ -2.02
VTA1Q06263 YKL044WYKL044W 321 nt2.41□□□□□ -2.02
VTA1Q06263 RPS29AYLR388W 171 nt2.41□□□□□ -2.02
VTA1Q06263 YOR055WYOR055W 435 nt2.41□□□□□ -2.02
VTA1Q06263 ATP3YBR039W 936 nt2.41□□□□□ -2.02
VTA1Q06263 JID1YPR061C 906 nt2.41□□□□□ -2.02
VTA1Q06263 DPB11YJL090C 2295 nt2.41□□□□□ -2.02
VTA1Q06263 VPS41YDR080W 2979 nt2.41□□□□□ -2.02
VTA1Q06263 SMY2YBR172C 2223 nt2.41□□□□□ -2.02
VTA1Q06263 YKU80YMR106C 1890 nt2.4□□□□□ -2.03
VTA1Q06263 HNT1YDL125C 477 nt2.4□□□□□ -2.03
VTA1Q06263 TIM10YHR005C-A 282 nt2.4□□□□□ -2.03
VTA1Q06263 YIL030W-AYIL030W-A 339 nt2.4□□□□□ -2.03
VTA1Q06263 TPM2YIL138C 486 nt2.4□□□□□ -2.03
VTA1Q06263 IST3YIR005W 447 nt2.4□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 34.1 ms