Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 ARF3YOR094W 552 nt3.16□□□□□ -1.9
SSM4P40318 HEM4YOR278W 828 nt3.16□□□□□ -1.9
SSM4P40318 SSQ1YLR369W 1974 nt3.16□□□□□ -1.9
SSM4P40318 POM152YMR129W 4014 nt3.15□□□□□ -1.9
SSM4P40318 YKR078WYKR078W 1758 nt3.15□□□□□ -1.9
SSM4P40318 YEL1YBL060W 2064 nt3.15□□□□□ -1.9
SSM4P40318 AI2Q0055 2565 nt3.15□□□□□ -1.91
SSM4P40318 ALY1YKR021W 2748 nt3.15□□□□□ -1.91
SSM4P40318 CRD1YDL142C 852 nt3.15□□□□□ -1.91
SSM4P40318 YHR086W-AYHR086W-A 162 nt3.15□□□□□ -1.91
SSM4P40318 YJR141WYJR141W 1044 nt3.15□□□□□ -1.91
SSM4P40318 VID24YBR105C 1089 nt3.15□□□□□ -1.91
SSM4P40318 RPS26BYER131W 360 nt3.14□□□□□ -1.91
SSM4P40318 YER175W-AYER175W-A 165 nt3.14□□□□□ -1.91
SSM4P40318 PRS3YHL011C 963 nt3.14□□□□□ -1.91
SSM4P40318 TCD1YHR003C 1290 nt3.14□□□□□ -1.91
SSM4P40318 RPS22BYLR367W 393 nt3.14□□□□□ -1.91
SSM4P40318 PDP3YLR455W 915 nt3.14□□□□□ -1.91
SSM4P40318 TAP42YMR028W 1101 nt3.14□□□□□ -1.91
SSM4P40318 RPL20AYMR242C 519 nt3.14□□□□□ -1.91
SSM4P40318 YPR014CYPR014C 330 nt3.14□□□□□ -1.91
SSM4P40318 RGR1YLR071C 3249 nt3.13□□□□□ -1.91
SSM4P40318 AFR1YDR085C 1863 nt3.13□□□□□ -1.91
SSM4P40318 CTF13YMR094W 1437 nt3.13□□□□□ -1.91
SSM4P40318 YDL016CYDL016C 303 nt3.13□□□□□ -1.91
SSM4P40318 snR84snR84 550 nt3.13□□□□□ -1.91
SSM4P40318 DAD4YDR320C-A 219 nt3.13□□□□□ -1.91
SSM4P40318 VPS74YDR372C 1038 nt3.13□□□□□ -1.91
SSM4P40318 YDR537CYDR537C 606 nt3.13□□□□□ -1.91
SSM4P40318 MRP49YKL167C 414 nt3.13□□□□□ -1.91
SSM4P40318 FPR1YNL135C 345 nt3.13□□□□□ -1.91
SSM4P40318 RCN2YOR220W 798 nt3.13□□□□□ -1.91
SSM4P40318 MF(ALPHA)1YPL187W 498 nt3.13□□□□□ -1.91
SSM4P40318 YBR071WYBR071W 636 nt3.13□□□□□ -1.91
SSM4P40318 YPR172WYPR172W 603 nt3.13□□□□□ -1.91
SSM4P40318 YOL098CYOL098C 3114 nt3.13□□□□□ -1.91
SSM4P40318 RAV1YJR033C 4074 nt3.12□□□□□ -1.91
SSM4P40318 TIM11YDR322C-A 291 nt3.12□□□□□ -1.91
SSM4P40318 CHZ1YER030W 462 nt3.12□□□□□ -1.91
SSM4P40318 SWS2YNL081C 432 nt3.12□□□□□ -1.91
SSM4P40318 YCL023CYCL023C 348 nt3.12□□□□□ -1.91
SSM4P40318 UBP1YDL122W 2430 nt3.12□□□□□ -1.91
SSM4P40318 PUT3YKL015W 2940 nt3.12□□□□□ -1.91
SSM4P40318 YMR31YFR049W 372 nt3.11□□□□□ -1.91
SSM4P40318 PEX4YGR133W 552 nt3.11□□□□□ -1.91
SSM4P40318 YOR364WYOR364W 369 nt3.11□□□□□ -1.91
SSM4P40318 RRG8YPR116W 834 nt3.11□□□□□ -1.91
SSM4P40318 PUF6YDR496C 1971 nt3.11□□□□□ -1.91
SSM4P40318 GIC1YHR061C 945 nt3.1□□□□□ -1.91
SSM4P40318 RSA1YPL193W 1146 nt3.1□□□□□ -1.91
SSM4P40318 TRZ1YKR079C 2517 nt3.09□□□□□ -1.92
SSM4P40318 BFR1YOR198C 1413 nt3.08□□□□□ -1.92
SSM4P40318 YDR098C-BYDR098C-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YDR210C-DYDR210C-D 5268 nt3.08□□□□□ -1.92
SSM4P40318 YDR316W-BYDR316W-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YDR365W-BYDR365W-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YER138CYER138C 5268 nt3.08□□□□□ -1.92
SSM4P40318 YER160CYER160C 5268 nt3.08□□□□□ -1.92
SSM4P40318 YGR038C-BYGR038C-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YGR161C-DYGR161C-D 5268 nt3.08□□□□□ -1.92
SSM4P40318 YJR027WYJR027W 5268 nt3.08□□□□□ -1.92
SSM4P40318 YLR157C-BYLR157C-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YML039WYML039W 5268 nt3.08□□□□□ -1.92
SSM4P40318 YML045WYML045W 5268 nt3.08□□□□□ -1.92
SSM4P40318 YMR050CYMR050C 5268 nt3.08□□□□□ -1.92
SSM4P40318 YOL103W-BYOL103W-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YBR012W-BYBR012W-B 5271 nt3.08□□□□□ -1.92
SSM4P40318 YOR142W-BYOR142W-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YPL257W-BYPL257W-B 5268 nt3.08□□□□□ -1.92
SSM4P40318 YPR158W-BYPR158W-B 5271 nt3.08□□□□□ -1.92
SSM4P40318 YDL009CYDL009C 324 nt3.08□□□□□ -1.92
SSM4P40318 FIN1YDR130C 876 nt3.08□□□□□ -1.92
SSM4P40318 YJL052C-AYJL052C-A 120 nt3.08□□□□□ -1.92
SSM4P40318 YDR179W-AYDR179W-A 1392 nt3.08□□□□□ -1.92
SSM4P40318 NPR3YHL023C 3441 nt3.07□□□□□ -1.92
SSM4P40318 CAJ1YER048C 1176 nt3.07□□□□□ -1.92
SSM4P40318 YIL029CYIL029C 429 nt3.07□□□□□ -1.92
SSM4P40318 YAL026C-AYAL026C-A 438 nt3.07□□□□□ -1.92
SSM4P40318 ILM1YJR118C 612 nt3.07□□□□□ -1.92
SSM4P40318 YMR144WYMR144W 1029 nt3.07□□□□□ -1.92
SSM4P40318 SIP18YMR175W 240 nt3.07□□□□□ -1.92
SSM4P40318 DGR1YNL130C-A 147 nt3.07□□□□□ -1.92
SSM4P40318 MES1YGR264C 2256 nt3.07□□□□□ -1.92
SSM4P40318 PSY2YNL201C 2577 nt3.07□□□□□ -1.92
SSM4P40318 SNX41YDR425W 1878 nt3.06□□□□□ -1.92
SSM4P40318 YER107W-AYER107W-A 321 nt3.06□□□□□ -1.92
SSM4P40318 ERV1YGR029W 570 nt3.06□□□□□ -1.92
SSM4P40318 APQ13YJL075C 417 nt3.06□□□□□ -1.92
SSM4P40318 YMR194C-AYMR194C-A 225 nt3.06□□□□□ -1.92
SSM4P40318 YNL179CYNL179C 438 nt3.06□□□□□ -1.92
SSM4P40318 RIO2YNL207W 1278 nt3.06□□□□□ -1.92
SSM4P40318 ISU1YPL135W 498 nt3.06□□□□□ -1.92
SSM4P40318 APC2YLR127C 2562 nt3.06□□□□□ -1.92
SSM4P40318 CYR1YJL005W 6081 nt3.05□□□□□ -1.92
SSM4P40318 IRC8YJL051W 2469 nt3.05□□□□□ -1.92
SSM4P40318 YGL042CYGL042C 306 nt3.05□□□□□ -1.92
SSM4P40318 YIR020CYIR020C 303 nt3.05□□□□□ -1.92
SSM4P40318 BET4YJL031C 984 nt3.05□□□□□ -1.92
SSM4P40318 YLR252WYLR252W 306 nt3.05□□□□□ -1.92
SSM4P40318 YMR304C-AYMR304C-A 351 nt3.05□□□□□ -1.92
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms