Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 LSM12P1-201ENST00000411836 588 ntBASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 AL355472.2-201ENST00000422958 438 ntBASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CDV3P1-201ENST00000471403 739 ntBASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SNAP47Q5SQN1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 DUSP5P2-201ENST00000426873 1033 ntBASIC20■□□□□ 0.79
SNAP47Q5SQN1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SNAP47Q5SQN1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNAP47Q5SQN1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 AC083880.1-201ENST00000608266 535 ntBASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SNAP47Q5SQN1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SNAP47Q5SQN1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 AC091874.3-201ENST00000512672 1195 ntBASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SNAP47Q5SQN1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SNAP47Q5SQN1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms