Protein–RNA interactions for Protein: P54787

VPS9, Vacuolar protein sorting-associated protein 9, yeastyeast

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS9P54787 YMR320WYMR320W 306 nt2.59□□□□□ -1.99
VPS9P54787 MED8YBR193C 672 nt2.59□□□□□ -1.99
VPS9P54787 SLN1YIL147C 3663 nt2.59□□□□□ -2
VPS9P54787 Q0255Q0255 1419 nt2.59□□□□□ -2
VPS9P54787 URK1YNR012W 1506 nt2.58□□□□□ -2
VPS9P54787 SIR3YLR442C 2937 nt2.58□□□□□ -2
VPS9P54787 PRP38YGR075C 729 nt2.58□□□□□ -2
VPS9P54787 YGR115CYGR115C 780 nt2.58□□□□□ -2
VPS9P54787 RPC25YKL144C 639 nt2.58□□□□□ -2
VPS9P54787 RNP1YLL046C 750 nt2.58□□□□□ -2
VPS9P54787 PAU23YLR037C 375 nt2.58□□□□□ -2
VPS9P54787 YNL319WYNL319W 441 nt2.58□□□□□ -2
VPS9P54787 YNR021WYNR021W 1215 nt2.58□□□□□ -2
VPS9P54787 CRS5YOR031W 210 nt2.58□□□□□ -2
VPS9P54787 YOR050CYOR050C 348 nt2.58□□□□□ -2
VPS9P54787 NEW1YPL226W 3591 nt2.58□□□□□ -2
VPS9P54787 YDR179W-AYDR179W-A 1392 nt2.58□□□□□ -2
VPS9P54787 SCY1YGL083W 2415 nt2.58□□□□□ -2
VPS9P54787 KRE33YNL132W 3171 nt2.57□□□□□ -2
VPS9P54787 YIL166CYIL166C 1629 nt2.57□□□□□ -2
VPS9P54787 FLO11YIR019C 4104 nt2.57□□□□□ -2
VPS9P54787 YHL006W-AYHL006W-A 354 nt2.57□□□□□ -2
VPS9P54787 VPS63YLR261C 327 nt2.57□□□□□ -2
VPS9P54787 YMR187CYMR187C 1296 nt2.57□□□□□ -2
VPS9P54787 SAP1YER047C 2694 nt2.57□□□□□ -2
VPS9P54787 SGM1YJR134C 2124 nt2.56□□□□□ -2
VPS9P54787 MES1YGR264C 2256 nt2.56□□□□□ -2
VPS9P54787 NFT1YKR103W 3657 nt2.56□□□□□ -2
VPS9P54787 YCR108CYCR108C 192 nt2.56□□□□□ -2
VPS9P54787 RPS17BYDR447C 411 nt2.56□□□□□ -2
VPS9P54787 PRE1YER012W 597 nt2.56□□□□□ -2
VPS9P54787 YIR020C-BYIR020C-B 735 nt2.56□□□□□ -2
VPS9P54787 EMC6YLL014W 327 nt2.56□□□□□ -2
VPS9P54787 MIX23YBL107C 591 nt2.56□□□□□ -2
VPS9P54787 POP7YBR167C 423 nt2.56□□□□□ -2
VPS9P54787 snR43snR43 209 nt2.56□□□□□ -2
VPS9P54787 15S_rRNA15S_rRNA 1649 nt2.56□□□□□ -2
VPS9P54787 HSC82YMR186W 2118 nt2.56□□□□□ -2
VPS9P54787 YPP1YGR198W 2454 nt2.56□□□□□ -2
VPS9P54787 PSK2YOL045W 3306 nt2.55□□□□□ -2
VPS9P54787 KIN82YCR091W 2163 nt2.55□□□□□ -2
VPS9P54787 YER189WYER189W 369 nt2.55□□□□□ -2
VPS9P54787 SWM2YNR004W 441 nt2.55□□□□□ -2
VPS9P54787 MPP6YNR024W 561 nt2.55□□□□□ -2
VPS9P54787 SNF12YNR023W 1701 nt2.54□□□□□ -2
VPS9P54787 RGA2YDR379W 3030 nt2.54□□□□□ -2
VPS9P54787 YDR203WYDR203W 318 nt2.54□□□□□ -2
VPS9P54787 ACB1YGR037C 264 nt2.54□□□□□ -2
VPS9P54787 YGR242WYGR242W 309 nt2.54□□□□□ -2
VPS9P54787 PET191YJR034W 327 nt2.54□□□□□ -2
VPS9P54787 YOR169CYOR169C 465 nt2.54□□□□□ -2
VPS9P54787 YPR145C-AYPR145C-A 237 nt2.54□□□□□ -2
VPS9P54787 ARR2YPR200C 393 nt2.54□□□□□ -2
VPS9P54787 ARP8YOR141C 2646 nt2.54□□□□□ -2
VPS9P54787 NCS2YNL119W 1482 nt2.53□□□□□ -2
VPS9P54787 KAR9YPL269W 1935 nt2.53□□□□□ -2
VPS9P54787 YDR199WYDR199W 366 nt2.53□□□□□ -2
VPS9P54787 TAD1YGL243W 1203 nt2.53□□□□□ -2
VPS9P54787 TWF1YGR080W 999 nt2.53□□□□□ -2
VPS9P54787 RAV1YJR033C 4074 nt2.52□□□□□ -2.01
VPS9P54787 YCR099CYCR099C 468 nt2.52□□□□□ -2.01
VPS9P54787 snR83snR83 306 nt2.52□□□□□ -2.01
VPS9P54787 RPS26BYER131W 360 nt2.52□□□□□ -2.01
VPS9P54787 RPL27AYHR010W 411 nt2.52□□□□□ -2.01
VPS9P54787 SFM1YOR021C 642 nt2.52□□□□□ -2.01
VPS9P54787 YOR055WYOR055W 435 nt2.52□□□□□ -2.01
VPS9P54787 TRM7YBR061C 933 nt2.52□□□□□ -2.01
VPS9P54787 EDS1YBR033W 2760 nt2.52□□□□□ -2.01
VPS9P54787 HYP2YEL034W 474 nt2.51□□□□□ -2.01
VPS9P54787 YGL109WYGL109W 324 nt2.51□□□□□ -2.01
VPS9P54787 YIP1YGR172C 747 nt2.51□□□□□ -2.01
VPS9P54787 YJL086CYJL086C 369 nt2.51□□□□□ -2.01
VPS9P54787 PAU8YAL068C 363 nt2.51□□□□□ -2.01
VPS9P54787 PAU20YOL161C 363 nt2.51□□□□□ -2.01
VPS9P54787 SLM4YBR077C 489 nt2.51□□□□□ -2.01
VPS9P54787 PDR11YIL013C 4236 nt2.5□□□□□ -2.01
VPS9P54787 UBR1YGR184C 5853 nt2.5□□□□□ -2.01
VPS9P54787 PHO2YDL106C 1680 nt2.5□□□□□ -2.01
VPS9P54787 ROY1YMR258C 1662 nt2.5□□□□□ -2.01
VPS9P54787 PBP4YDL053C 558 nt2.5□□□□□ -2.01
VPS9P54787 YDL163WYDL163W 303 nt2.5□□□□□ -2.01
VPS9P54787 YRB1YDR002W 606 nt2.5□□□□□ -2.01
VPS9P54787 TIM9YEL020W-A 264 nt2.5□□□□□ -2.01
VPS9P54787 PGD1YGL025C 1194 nt2.5□□□□□ -2.01
VPS9P54787 MST27YGL051W 705 nt2.5□□□□□ -2.01
VPS9P54787 RPL25YOL127W 429 nt2.5□□□□□ -2.01
VPS9P54787 VID24YBR105C 1089 nt2.5□□□□□ -2.01
VPS9P54787 PSO2YMR137C 1986 nt2.5□□□□□ -2.01
VPS9P54787 VPS41YDR080W 2979 nt2.49□□□□□ -2.01
VPS9P54787 CBF2YGR140W 2871 nt2.49□□□□□ -2.01
VPS9P54787 BAS1YKR099W 2436 nt2.49□□□□□ -2.01
VPS9P54787 SGS1YMR190C 4344 nt2.49□□□□□ -2.01
VPS9P54787 DAD1YDR016C 285 nt2.49□□□□□ -2.01
VPS9P54787 YDR248CYDR248C 582 nt2.49□□□□□ -2.01
VPS9P54787 SPO11YHL022C 1197 nt2.49□□□□□ -2.01
VPS9P54787 YIL156W-BYIL156W-B 222 nt2.49□□□□□ -2.01
VPS9P54787 PDP3YLR455W 915 nt2.49□□□□□ -2.01
VPS9P54787 RPL36BYPL249C-A 303 nt2.49□□□□□ -2.01
VPS9P54787 PHO91YNR013C 2685 nt2.49□□□□□ -2.01
VPS9P54787 YPR089WYPR089W 2667 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms