Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 tL(CAA)LtL(CAA)L 82 nt3.7□□□□□ -1.82
DEF1P35732 tL(CAA)MtL(CAA)M 82 nt3.7□□□□□ -1.82
DEF1P35732 tL(CAA)NtL(CAA)N 82 nt3.7□□□□□ -1.82
DEF1P35732 PHD1YKL043W 1101 nt3.7□□□□□ -1.82
DEF1P35732 BLI1YKL061W 342 nt3.7□□□□□ -1.82
DEF1P35732 YLR031WYLR031W 561 nt3.7□□□□□ -1.82
DEF1P35732 YLR076CYLR076C 423 nt3.7□□□□□ -1.82
DEF1P35732 UBC7YMR022W 498 nt3.7□□□□□ -1.82
DEF1P35732 HHT2YNL031C 411 nt3.7□□□□□ -1.82
DEF1P35732 STE5YDR103W 2754 nt3.7□□□□□ -1.82
DEF1P35732 ARO80YDR421W 2853 nt3.7□□□□□ -1.82
DEF1P35732 MIT1YEL007W 2001 nt3.7□□□□□ -1.82
DEF1P35732 YGR117CYGR117C 1431 nt3.7□□□□□ -1.82
DEF1P35732 EPO1YMR124W 2832 nt3.69□□□□□ -1.82
DEF1P35732 DBF20YPR111W 1695 nt3.69□□□□□ -1.82
DEF1P35732 SRC1YML034W 2505 nt3.69□□□□□ -1.82
DEF1P35732 YGR027W-BYGR027W-B 5268 nt3.69□□□□□ -1.82
DEF1P35732 YLR227W-BYLR227W-B 5268 nt3.69□□□□□ -1.82
DEF1P35732 YPR158C-DYPR158C-D 5268 nt3.69□□□□□ -1.82
DEF1P35732 DSF2YBR007C 2211 nt3.69□□□□□ -1.82
DEF1P35732 IES6YEL044W 501 nt3.69□□□□□ -1.82
DEF1P35732 MIC19YFR011C 513 nt3.69□□□□□ -1.82
DEF1P35732 YIL046W-AYIL046W-A 165 nt3.69□□□□□ -1.82
DEF1P35732 ISF1YMR081C 1017 nt3.69□□□□□ -1.82
DEF1P35732 VAC8YEL013W 1737 nt3.69□□□□□ -1.82
DEF1P35732 RDS1YCR106W 2499 nt3.68□□□□□ -1.82
DEF1P35732 PSP1YDR505C 2526 nt3.68□□□□□ -1.82
DEF1P35732 RNR4YGR180C 1038 nt3.68□□□□□ -1.82
DEF1P35732 RPS0AYGR214W 759 nt3.68□□□□□ -1.82
DEF1P35732 YIR014WYIR014W 729 nt3.68□□□□□ -1.82
DEF1P35732 YAL031W-AYAL031W-A 309 nt3.68□□□□□ -1.82
DEF1P35732 ATX1YNL259C 222 nt3.68□□□□□ -1.82
DEF1P35732 YOL160WYOL160W 342 nt3.68□□□□□ -1.82
DEF1P35732 ISM1YPL040C 3009 nt3.68□□□□□ -1.82
DEF1P35732 ROY1YMR258C 1662 nt3.68□□□□□ -1.82
DEF1P35732 YJR003CYJR003C 1560 nt3.68□□□□□ -1.82
DEF1P35732 SCY1YGL083W 2415 nt3.68□□□□□ -1.82
DEF1P35732 YDR194W-AYDR194W-A 153 nt3.67□□□□□ -1.82
DEF1P35732 FRQ1YDR373W 573 nt3.67□□□□□ -1.82
DEF1P35732 RPL19BYBL027W 570 nt3.67□□□□□ -1.82
DEF1P35732 YBL108WYBL108W 306 nt3.67□□□□□ -1.82
DEF1P35732 SYO1YDL063C 1863 nt3.67□□□□□ -1.82
DEF1P35732 HUL5YGL141W 2733 nt3.66□□□□□ -1.82
DEF1P35732 snR68snR68 136 nt3.66□□□□□ -1.82
DEF1P35732 YDL068WYDL068W 330 nt3.66□□□□□ -1.82
DEF1P35732 RPL1BYGL135W 654 nt3.66□□□□□ -1.82
DEF1P35732 YPS5YGL259W 498 nt3.66□□□□□ -1.82
DEF1P35732 RPL11BYGR085C 525 nt3.66□□□□□ -1.82
DEF1P35732 RPL39YJL189W 156 nt3.66□□□□□ -1.82
DEF1P35732 LSM8YJR022W 330 nt3.66□□□□□ -1.82
DEF1P35732 YMR316C-AYMR316C-A 312 nt3.66□□□□□ -1.82
DEF1P35732 RRD2YPL152W 1077 nt3.66□□□□□ -1.82
DEF1P35732 RPL1AYPL220W 654 nt3.66□□□□□ -1.82
DEF1P35732 RPL11AYPR102C 525 nt3.66□□□□□ -1.82
DEF1P35732 STI1YOR027W 1770 nt3.66□□□□□ -1.82
DEF1P35732 BRE5YNR051C 1548 nt3.65□□□□□ -1.82
DEF1P35732 YIL141WYIL141W 390 nt3.65□□□□□ -1.83
DEF1P35732 YKL033W-AYKL033W-A 711 nt3.65□□□□□ -1.83
DEF1P35732 YBL008W-AYBL008W-A 240 nt3.65□□□□□ -1.83
DEF1P35732 GIS2YNL255C 462 nt3.65□□□□□ -1.83
DEF1P35732 MRPL50YNR022C 420 nt3.65□□□□□ -1.83
DEF1P35732 INO4YOL108C 456 nt3.65□□□□□ -1.83
DEF1P35732 YPL152W-AYPL152W-A 99 nt3.65□□□□□ -1.83
DEF1P35732 SEC15YGL233W 2733 nt3.65□□□□□ -1.83
DEF1P35732 YJL132WYJL132W 2253 nt3.65□□□□□ -1.83
DEF1P35732 LYS9YNR050C 1341 nt3.65□□□□□ -1.83
DEF1P35732 UTP15YMR093W 1542 nt3.65□□□□□ -1.83
DEF1P35732 PRM15YMR278W 1869 nt3.64□□□□□ -1.83
DEF1P35732 MDM36YPR083W 1740 nt3.64□□□□□ -1.83
DEF1P35732 NOG1YPL093W 1944 nt3.64□□□□□ -1.83
DEF1P35732 DUF1YOL087C 3351 nt3.64□□□□□ -1.83
DEF1P35732 PUF6YDR496C 1971 nt3.64□□□□□ -1.83
DEF1P35732 YBR238CYBR238C 2196 nt3.64□□□□□ -1.83
DEF1P35732 EMI1YDR512C 564 nt3.64□□□□□ -1.83
DEF1P35732 YGL165CYGL165C 579 nt3.64□□□□□ -1.83
DEF1P35732 SGN1YIR001C 753 nt3.64□□□□□ -1.83
DEF1P35732 YJL015CYJL015C 285 nt3.64□□□□□ -1.83
DEF1P35732 IRC18YJL037W 675 nt3.64□□□□□ -1.83
DEF1P35732 EMC2YJR088C 879 nt3.64□□□□□ -1.83
DEF1P35732 TSC3YBR058C-A 243 nt3.64□□□□□ -1.83
DEF1P35732 DPB3YBR278W 606 nt3.64□□□□□ -1.83
DEF1P35732 snR80snR80 171 nt3.63□□□□□ -1.83
DEF1P35732 MDV1YJL112W 2145 nt3.63□□□□□ -1.83
DEF1P35732 BIL1YOR304C-A 231 nt3.63□□□□□ -1.83
DEF1P35732 snR35snR35 204 nt3.63□□□□□ -1.83
DEF1P35732 YRR1YOR162C 2433 nt3.63□□□□□ -1.83
DEF1P35732 FAT1YBR041W 2010 nt3.63□□□□□ -1.83
DEF1P35732 RPA135YPR010C 3612 nt3.63□□□□□ -1.83
DEF1P35732 ARO1YDR127W 4767 nt3.62□□□□□ -1.83
DEF1P35732 RNH70YGR276C 1662 nt3.62□□□□□ -1.83
DEF1P35732 YDR406W-AYDR406W-A 246 nt3.62□□□□□ -1.83
DEF1P35732 ATP8Q0080 147 nt3.62□□□□□ -1.83
DEF1P35732 YMR294W-AYMR294W-A 360 nt3.62□□□□□ -1.83
DEF1P35732 YPR099CYPR099C 357 nt3.62□□□□□ -1.83
DEF1P35732 RAX2YLR084C 3663 nt3.62□□□□□ -1.83
DEF1P35732 EXO70YJL085W 1872 nt3.62□□□□□ -1.83
DEF1P35732 ULP1YPL020C 1866 nt3.62□□□□□ -1.83
DEF1P35732 LOS1YKL205W 3303 nt3.62□□□□□ -1.83
DEF1P35732 HOP1YIL072W 1818 nt3.61□□□□□ -1.83
DEF1P35732 YGR265WYGR265W 411 nt3.61□□□□□ -1.83
Retrieved 100 of 7,029 protein–RNA pairs in 16.2 ms