Protein–RNA interactions for Protein: Q03834

MSH6, DNA mismatch repair protein MSH6, yeastyeast

Predictions only

Length 1,242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH6Q03834 YIL171WYIL171W 330 nt4.41□□□□□ -1.7
MSH6Q03834 YAR060CYAR060C 336 nt4.41□□□□□ -1.7
MSH6Q03834 NSL1YPL233W 651 nt4.41□□□□□ -1.7
MSH6Q03834 YPR010C-AYPR010C-A 219 nt4.41□□□□□ -1.7
MSH6Q03834 MIP6YHR015W 1980 nt4.41□□□□□ -1.7
MSH6Q03834 YPK9YOR291W 4419 nt4.41□□□□□ -1.7
MSH6Q03834 YLR177WYLR177W 1887 nt4.41□□□□□ -1.7
MSH6Q03834 FLO8YER109C 2400 nt4.41□□□□□ -1.7
MSH6Q03834 VAC8YEL013W 1737 nt4.41□□□□□ -1.7
MSH6Q03834 SWT1YOR166C 1377 nt4.4□□□□□ -1.7
MSH6Q03834 RIA1YNL163C 3333 nt4.4□□□□□ -1.7
MSH6Q03834 PIN4YBL051C 2007 nt4.4□□□□□ -1.7
MSH6Q03834 RPS29BYDL061C 171 nt4.4□□□□□ -1.71
MSH6Q03834 YJR111CYJR111C 852 nt4.4□□□□□ -1.71
MSH6Q03834 RRD2YPL152W 1077 nt4.4□□□□□ -1.71
MSH6Q03834 GNT1YOR320C 1476 nt4.4□□□□□ -1.71
MSH6Q03834 YER077CYER077C 2067 nt4.4□□□□□ -1.71
MSH6Q03834 PDR5YOR153W 4536 nt4.4□□□□□ -1.71
MSH6Q03834 MAK5YBR142W 2322 nt4.4□□□□□ -1.71
MSH6Q03834 OSH6YKR003W 1347 nt4.4□□□□□ -1.71
MSH6Q03834 PEX30YLR324W 1572 nt4.4□□□□□ -1.71
MSH6Q03834 YCF1YDR135C 4548 nt4.4□□□□□ -1.71
MSH6Q03834 AVT7YIL088C 1473 nt4.39□□□□□ -1.71
MSH6Q03834 GWT1YJL091C 1473 nt4.39□□□□□ -1.71
MSH6Q03834 POL4YCR014C 1749 nt4.39□□□□□ -1.71
MSH6Q03834 YDR090CYDR090C 933 nt4.39□□□□□ -1.71
MSH6Q03834 tQ(UUG)CtQ(UUG)C 72 nt4.39□□□□□ -1.71
MSH6Q03834 tQ(UUG)D1tQ(UUG)D1 72 nt4.39□□□□□ -1.71
MSH6Q03834 tQ(UUG)D2tQ(UUG)D2 72 nt4.39□□□□□ -1.71
MSH6Q03834 tQ(UUG)D3tQ(UUG)D3 72 nt4.39□□□□□ -1.71
MSH6Q03834 tQ(UUG)E1tQ(UUG)E1 72 nt4.39□□□□□ -1.71
MSH6Q03834 tQ(UUG)HtQ(UUG)H 72 nt4.39□□□□□ -1.71
MSH6Q03834 tQ(UUG)LtQ(UUG)L 72 nt4.39□□□□□ -1.71
MSH6Q03834 YHR063W-AYHR063W-A 336 nt4.39□□□□□ -1.71
MSH6Q03834 YIL054WYIL054W 318 nt4.39□□□□□ -1.71
MSH6Q03834 YAR029WYAR029W 225 nt4.39□□□□□ -1.71
MSH6Q03834 CWC24YLR323C 780 nt4.39□□□□□ -1.71
MSH6Q03834 STP2YHR006W 1626 nt4.39□□□□□ -1.71
MSH6Q03834 EAP1YKL204W 1899 nt4.39□□□□□ -1.71
MSH6Q03834 FAA1YOR317W 2103 nt4.39□□□□□ -1.71
MSH6Q03834 GCR1YPL075W 2358 nt4.39□□□□□ -1.71
MSH6Q03834 OPT2YPR194C 2634 nt4.39□□□□□ -1.71
MSH6Q03834 EBS1YDR206W 2655 nt4.39□□□□□ -1.71
MSH6Q03834 JHD2YJR119C 2187 nt4.38□□□□□ -1.71
MSH6Q03834 VAC14YLR386W 2643 nt4.38□□□□□ -1.71
MSH6Q03834 SPT23YKL020C 3249 nt4.38□□□□□ -1.71
MSH6Q03834 EMI1YDR512C 564 nt4.38□□□□□ -1.71
MSH6Q03834 YEL075CYEL075C 369 nt4.38□□□□□ -1.71
MSH6Q03834 YER107W-AYER107W-A 321 nt4.38□□□□□ -1.71
MSH6Q03834 SMX2YFL017W-A 234 nt4.38□□□□□ -1.71
MSH6Q03834 ILV5YLR355C 1188 nt4.38□□□□□ -1.71
MSH6Q03834 UNG1YML021C 1080 nt4.38□□□□□ -1.71
MSH6Q03834 RAD14YMR201C 1116 nt4.38□□□□□ -1.71
MSH6Q03834 RPL16BYNL069C 597 nt4.38□□□□□ -1.71
MSH6Q03834 KIP3YGL216W 2418 nt4.38□□□□□ -1.71
MSH6Q03834 TRK1YJL129C 3708 nt4.38□□□□□ -1.71
MSH6Q03834 RPS8BYER102W 603 nt4.37□□□□□ -1.71
MSH6Q03834 PDX1YGR193C 1233 nt4.37□□□□□ -1.71
MSH6Q03834 RPS24BYIL069C 408 nt4.37□□□□□ -1.71
MSH6Q03834 YNL198CYNL198C 303 nt4.37□□□□□ -1.71
MSH6Q03834 OM14YBR230C 405 nt4.37□□□□□ -1.71
MSH6Q03834 PCK1YKR097W 1650 nt4.37□□□□□ -1.71
MSH6Q03834 YNL193WYNL193W 1677 nt4.37□□□□□ -1.71
MSH6Q03834 RPG1YBR079C 2895 nt4.37□□□□□ -1.71
MSH6Q03834 ICR1ICR1 3199 nt4.37□□□□□ -1.71
MSH6Q03834 BEM4YPL161C 1902 nt4.36□□□□□ -1.71
MSH6Q03834 FKH2YNL068C 2589 nt4.36□□□□□ -1.71
MSH6Q03834 CDC14YFR028C 1656 nt4.36□□□□□ -1.71
MSH6Q03834 FOX2YKR009C 2703 nt4.36□□□□□ -1.71
MSH6Q03834 RPS18AYDR450W 441 nt4.36□□□□□ -1.71
MSH6Q03834 YPS5YGL259W 498 nt4.36□□□□□ -1.71
MSH6Q03834 OTU2YHL013C 924 nt4.36□□□□□ -1.71
MSH6Q03834 FMP46YKR049C 402 nt4.36□□□□□ -1.71
MSH6Q03834 TEN1YLR010C 483 nt4.36□□□□□ -1.71
MSH6Q03834 ICY1YMR195W 384 nt4.36□□□□□ -1.71
MSH6Q03834 PIS1YPR113W 663 nt4.36□□□□□ -1.71
MSH6Q03834 YBR141W-AYBR141W-A 96 nt4.36□□□□□ -1.71
MSH6Q03834 SEG1YMR086W 2883 nt4.36□□□□□ -1.71
MSH6Q03834 ECM22YLR228C 2445 nt4.36□□□□□ -1.71
MSH6Q03834 PEX6YNL329C 3093 nt4.36□□□□□ -1.71
MSH6Q03834 YDR338CYDR338C 2088 nt4.36□□□□□ -1.71
MSH6Q03834 REB1YBR049C 2433 nt4.35□□□□□ -1.71
MSH6Q03834 TRX3YCR083W 384 nt4.35□□□□□ -1.71
MSH6Q03834 CNB1YKL190W 528 nt4.35□□□□□ -1.71
MSH6Q03834 TSC3YBR058C-A 243 nt4.35□□□□□ -1.71
MSH6Q03834 PHM7YOL084W 2976 nt4.35□□□□□ -1.71
MSH6Q03834 PRM15YMR278W 1869 nt4.35□□□□□ -1.71
MSH6Q03834 KRE5YOR336W 4098 nt4.34□□□□□ -1.71
MSH6Q03834 IMH1YLR309C 2736 nt4.34□□□□□ -1.71
MSH6Q03834 DIP2YLR129W 2832 nt4.34□□□□□ -1.71
MSH6Q03834 YDR194W-AYDR194W-A 153 nt4.34□□□□□ -1.71
MSH6Q03834 ATP8Q0080 147 nt4.34□□□□□ -1.71
MSH6Q03834 RPS4BYHR203C 786 nt4.34□□□□□ -1.71
MSH6Q03834 ZEO1YOL109W 342 nt4.34□□□□□ -1.71
MSH6Q03834 YPR039WYPR039W 336 nt4.34□□□□□ -1.71
MSH6Q03834 SWI1YPL016W 3945 nt4.34□□□□□ -1.71
MSH6Q03834 HOP1YIL072W 1818 nt4.34□□□□□ -1.71
MSH6Q03834 NAT1YDL040C 2565 nt4.34□□□□□ -1.72
MSH6Q03834 YGR053CYGR053C 852 nt4.33□□□□□ -1.72
MSH6Q03834 YIR014WYIR014W 729 nt4.33□□□□□ -1.72
Retrieved 100 of 7,029 protein–RNA pairs in 51.5 ms