Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 YCR045W-AYCR045W-A 351 nt2.26□□□□□ -2.05
RPB9P27999 YDL158CYDL158C 309 nt2.26□□□□□ -2.05
RPB9P27999 YPR1YDR368W 939 nt2.26□□□□□ -2.05
RPB9P27999 YEL050W-AYEL050W-A 192 nt2.26□□□□□ -2.05
RPB9P27999 QCR10YHR001W-A 234 nt2.26□□□□□ -2.05
RPB9P27999 tW(CCA)G1tW(CCA)G1 72 nt2.26□□□□□ -2.05
RPB9P27999 tW(CCA)G2tW(CCA)G2 72 nt2.26□□□□□ -2.05
RPB9P27999 tW(CCA)JtW(CCA)J 72 nt2.26□□□□□ -2.05
RPB9P27999 tW(CCA)KtW(CCA)K 72 nt2.26□□□□□ -2.05
RPB9P27999 tW(CCA)MtW(CCA)M 72 nt2.26□□□□□ -2.05
RPB9P27999 tW(CCA)PtW(CCA)P 72 nt2.26□□□□□ -2.05
RPB9P27999 YJL133C-AYJL133C-A 225 nt2.26□□□□□ -2.05
RPB9P27999 YLR230WYLR230W 306 nt2.26□□□□□ -2.05
RPB9P27999 PAI3YMR174C 207 nt2.26□□□□□ -2.05
RPB9P27999 YPL142CYPL142C 318 nt2.26□□□□□ -2.05
RPB9P27999 RSN1YMR266W 2862 nt2.26□□□□□ -2.05
RPB9P27999 URB2YJR041C 3525 nt2.26□□□□□ -2.05
RPB9P27999 TCB2YNL087W 3537 nt2.26□□□□□ -2.05
RPB9P27999 VTC4YJL012C 2166 nt2.26□□□□□ -2.05
RPB9P27999 RAX2YLR084C 3663 nt2.26□□□□□ -2.05
RPB9P27999 AGE1YDR524C 1449 nt2.25□□□□□ -2.05
RPB9P27999 FKS3YMR306W 5358 nt2.25□□□□□ -2.05
RPB9P27999 ARK1YNL020C 1917 nt2.25□□□□□ -2.05
RPB9P27999 CBP2YHL038C 1893 nt2.25□□□□□ -2.05
RPB9P27999 KEI1YDR367W 666 nt2.25□□□□□ -2.05
RPB9P27999 YEA4YEL004W 1029 nt2.25□□□□□ -2.05
RPB9P27999 AST2YER101C 1293 nt2.25□□□□□ -2.05
RPB9P27999 TAD1YGL243W 1203 nt2.25□□□□□ -2.05
RPB9P27999 PEF1YGR058W 1008 nt2.25□□□□□ -2.05
RPB9P27999 YGR160WYGR160W 612 nt2.25□□□□□ -2.05
RPB9P27999 RCN1YKL159C 636 nt2.25□□□□□ -2.05
RPB9P27999 MRPL38YKL170W 417 nt2.25□□□□□ -2.05
RPB9P27999 SRL3YKR091W 741 nt2.25□□□□□ -2.05
RPB9P27999 YNL050CYNL050C 813 nt2.25□□□□□ -2.05
RPB9P27999 RPL16BYNL069C 597 nt2.25□□□□□ -2.05
RPB9P27999 YPL119C-AYPL119C-A 264 nt2.25□□□□□ -2.05
RPB9P27999 PDR3YBL005W 2931 nt2.25□□□□□ -2.05
RPB9P27999 BRE5YNR051C 1548 nt2.25□□□□□ -2.05
RPB9P27999 JJJ1YNL227C 1773 nt2.25□□□□□ -2.05
RPB9P27999 FUN30YAL019W 3396 nt2.25□□□□□ -2.05
RPB9P27999 BIT61YJL058C 1632 nt2.24□□□□□ -2.05
RPB9P27999 RPN3YER021W 1572 nt2.24□□□□□ -2.05
RPB9P27999 ERT1YBR239C 1590 nt2.24□□□□□ -2.05
RPB9P27999 YKL100CYKL100C 1764 nt2.24□□□□□ -2.05
RPB9P27999 PUF6YDR496C 1971 nt2.24□□□□□ -2.05
RPB9P27999 REV3YPL167C 4515 nt2.24□□□□□ -2.05
RPB9P27999 YCR013CYCR013C 648 nt2.24□□□□□ -2.05
RPB9P27999 SAE2YGL175C 1038 nt2.24□□□□□ -2.05
RPB9P27999 YGR121W-AYGR121W-A 216 nt2.24□□□□□ -2.05
RPB9P27999 EST3YIL009C-A 546 nt2.24□□□□□ -2.05
RPB9P27999 YAP5YIR018W 738 nt2.24□□□□□ -2.05
RPB9P27999 CAP1YKL007W 807 nt2.24□□□□□ -2.05
RPB9P27999 TMA10YLR327C 261 nt2.24□□□□□ -2.05
RPB9P27999 CCW14YLR390W-A 717 nt2.24□□□□□ -2.05
RPB9P27999 BRX1YOL077C 876 nt2.24□□□□□ -2.05
RPB9P27999 YOR277CYOR277C 309 nt2.24□□□□□ -2.05
RPB9P27999 MBA1YBR185C 837 nt2.24□□□□□ -2.05
RPB9P27999 snR43snR43 209 nt2.24□□□□□ -2.05
RPB9P27999 NMD2YHR077C 3270 nt2.24□□□□□ -2.05
RPB9P27999 PRP8YHR165C 7242 nt2.24□□□□□ -2.05
RPB9P27999 PDS5YMR076C 3834 nt2.23□□□□□ -2.05
RPB9P27999 YNL193WYNL193W 1677 nt2.23□□□□□ -2.05
RPB9P27999 GPM2YDL021W 936 nt2.23□□□□□ -2.05
RPB9P27999 YDR262WYDR262W 819 nt2.23□□□□□ -2.05
RPB9P27999 RSM28YDR494W 1086 nt2.23□□□□□ -2.05
RPB9P27999 YHL044WYHL044W 708 nt2.23□□□□□ -2.05
RPB9P27999 MST28YAR033W 705 nt2.23□□□□□ -2.05
RPB9P27999 CDC123YLR215C 1083 nt2.23□□□□□ -2.05
RPB9P27999 VMA6YLR447C 1038 nt2.23□□□□□ -2.05
RPB9P27999 ATX1YNL259C 222 nt2.23□□□□□ -2.05
RPB9P27999 CSI2YOL007C 1026 nt2.23□□□□□ -2.05
RPB9P27999 YOR283WYOR283W 693 nt2.23□□□□□ -2.05
RPB9P27999 AFT2YPL202C 1251 nt2.23□□□□□ -2.05
RPB9P27999 NTC20YBR188C 423 nt2.23□□□□□ -2.05
RPB9P27999 YCL002CYCL002C 792 nt2.23□□□□□ -2.05
RPB9P27999 YLR001CYLR001C 2589 nt2.23□□□□□ -2.05
RPB9P27999 AVT2YEL064C 1443 nt2.23□□□□□ -2.05
RPB9P27999 SRC1YML034W 2505 nt2.23□□□□□ -2.05
RPB9P27999 LST4YKL176C 2487 nt2.23□□□□□ -2.05
RPB9P27999 YDR338CYDR338C 2088 nt2.22□□□□□ -2.05
RPB9P27999 VPS41YDR080W 2979 nt2.22□□□□□ -2.05
RPB9P27999 PDC2YDR081C 2778 nt2.22□□□□□ -2.05
RPB9P27999 ASI3YNL008C 2031 nt2.22□□□□□ -2.05
RPB9P27999 PMR1YGL167C 2853 nt2.22□□□□□ -2.05
RPB9P27999 YER066C-AYER066C-A 501 nt2.22□□□□□ -2.05
RPB9P27999 MCR1YKL150W 909 nt2.22□□□□□ -2.05
RPB9P27999 YPT52YKR014C 705 nt2.22□□□□□ -2.05
RPB9P27999 YKR033CYKR033C 426 nt2.22□□□□□ -2.05
RPB9P27999 DAD2YKR083C 402 nt2.22□□□□□ -2.05
RPB9P27999 PAU23YLR037C 375 nt2.22□□□□□ -2.05
RPB9P27999 LIP2YLR239C 987 nt2.22□□□□□ -2.05
RPB9P27999 YNL043CYNL043C 321 nt2.22□□□□□ -2.05
RPB9P27999 RPL20BYOR312C 519 nt2.22□□□□□ -2.05
RPB9P27999 ARL3YPL051W 597 nt2.22□□□□□ -2.05
RPB9P27999 CUR1YPR158W 759 nt2.22□□□□□ -2.05
RPB9P27999 YPR203WYPR203W 309 nt2.22□□□□□ -2.05
RPB9P27999 SUS1YBR111W-A 291 nt2.22□□□□□ -2.05
RPB9P27999 CBP6YBR120C 489 nt2.22□□□□□ -2.05
RPB9P27999 BOI1YBL085W 2943 nt2.22□□□□□ -2.05
RPB9P27999 MED1YPR070W 1701 nt2.22□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 41.3 ms