Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 REC8YPR007C 2043 nt3.32□□□□□ -1.88
SUB1P54000 SPB1YCL054W 2526 nt3.32□□□□□ -1.88
SUB1P54000 YGL230CYGL230C 444 nt3.32□□□□□ -1.88
SUB1P54000 ERG25YGR060W 930 nt3.32□□□□□ -1.88
SUB1P54000 YAL066WYAL066W 309 nt3.32□□□□□ -1.88
SUB1P54000 RPL22AYLR061W 366 nt3.32□□□□□ -1.88
SUB1P54000 MST28YAR033W 705 nt3.32□□□□□ -1.88
SUB1P54000 SMD2YLR275W 333 nt3.32□□□□□ -1.88
SUB1P54000 IRC21YMR073C 606 nt3.32□□□□□ -1.88
SUB1P54000 MSN1YOL116W 1149 nt3.32□□□□□ -1.88
SUB1P54000 DIM1YPL266W 957 nt3.32□□□□□ -1.88
SUB1P54000 PIS1YPR113W 663 nt3.32□□□□□ -1.88
SUB1P54000 AME1YBR211C 975 nt3.32□□□□□ -1.88
SUB1P54000 SSP1YHR184W 1716 nt3.32□□□□□ -1.88
SUB1P54000 TRS130YMR218C 3309 nt3.32□□□□□ -1.88
SUB1P54000 RMD6YEL072W 696 nt3.31□□□□□ -1.88
SUB1P54000 MIC19YFR011C 513 nt3.31□□□□□ -1.88
SUB1P54000 UTP11YKL099C 753 nt3.31□□□□□ -1.88
SUB1P54000 MRPL16YBL038W 699 nt3.31□□□□□ -1.88
SUB1P54000 YMR294W-AYMR294W-A 360 nt3.31□□□□□ -1.88
SUB1P54000 RRT16YNL105W 429 nt3.31□□□□□ -1.88
SUB1P54000 YOL134CYOL134C 390 nt3.31□□□□□ -1.88
SUB1P54000 FAR11YNL127W 2862 nt3.31□□□□□ -1.88
SUB1P54000 RLF2YPR018W 1821 nt3.3□□□□□ -1.88
SUB1P54000 OTU2YHL013C 924 nt3.3□□□□□ -1.88
SUB1P54000 SUI2YJR007W 915 nt3.3□□□□□ -1.88
SUB1P54000 NYV1YLR093C 762 nt3.3□□□□□ -1.88
SUB1P54000 RPS29AYLR388W 171 nt3.3□□□□□ -1.88
SUB1P54000 SGT1YOR057W 1188 nt3.3□□□□□ -1.88
SUB1P54000 RET3YPL010W 570 nt3.3□□□□□ -1.88
SUB1P54000 ISU1YPL135W 498 nt3.3□□□□□ -1.88
SUB1P54000 CIN2YPL241C 807 nt3.3□□□□□ -1.88
SUB1P54000 YDR338CYDR338C 2088 nt3.3□□□□□ -1.88
SUB1P54000 YBT1YLL048C 4986 nt3.3□□□□□ -1.88
SUB1P54000 LST4YKL176C 2487 nt3.3□□□□□ -1.88
SUB1P54000 LRG1YDL240W 3054 nt3.3□□□□□ -1.88
SUB1P54000 PUF4YGL014W 2667 nt3.29□□□□□ -1.88
SUB1P54000 snR78snR78 87 nt3.29□□□□□ -1.88
SUB1P54000 IES6YEL044W 501 nt3.29□□□□□ -1.88
SUB1P54000 MTC3YGL226W 372 nt3.29□□□□□ -1.88
SUB1P54000 YPT52YKR014C 705 nt3.29□□□□□ -1.88
SUB1P54000 DCP1YOL149W 696 nt3.29□□□□□ -1.88
SUB1P54000 CUR1YPR158W 759 nt3.29□□□□□ -1.88
SUB1P54000 VPS53YJL029C 2469 nt3.29□□□□□ -1.88
SUB1P54000 RAD18YCR066W 1464 nt3.28□□□□□ -1.88
SUB1P54000 SMY2YBR172C 2223 nt3.28□□□□□ -1.88
SUB1P54000 YGR027W-BYGR027W-B 5268 nt3.28□□□□□ -1.88
SUB1P54000 YLR227W-BYLR227W-B 5268 nt3.28□□□□□ -1.88
SUB1P54000 YPR158C-DYPR158C-D 5268 nt3.28□□□□□ -1.88
SUB1P54000 YDL071CYDL071C 375 nt3.28□□□□□ -1.88
SUB1P54000 snR76snR76 109 nt3.28□□□□□ -1.88
SUB1P54000 STE2YFL026W 1296 nt3.28□□□□□ -1.88
SUB1P54000 DOG2YHR043C 741 nt3.28□□□□□ -1.88
SUB1P54000 YHR086W-AYHR086W-A 162 nt3.28□□□□□ -1.88
SUB1P54000 BMT5YIL096C 1011 nt3.28□□□□□ -1.88
SUB1P54000 CPR7YJR032W 1182 nt3.28□□□□□ -1.88
SUB1P54000 YAL042C-AYAL042C-A 378 nt3.28□□□□□ -1.88
SUB1P54000 SDH3YKL141W 597 nt3.28□□□□□ -1.88
SUB1P54000 CRS5YOR031W 210 nt3.28□□□□□ -1.88
SUB1P54000 MRD1YPR112C 2664 nt3.28□□□□□ -1.88
SUB1P54000 CIN8YEL061C 3003 nt3.28□□□□□ -1.88
SUB1P54000 YJL132WYJL132W 2253 nt3.28□□□□□ -1.88
SUB1P54000 FLO11YIR019C 4104 nt3.28□□□□□ -1.88
SUB1P54000 DNM1YLL001W 2274 nt3.27□□□□□ -1.89
SUB1P54000 RIF1YBR275C 5751 nt3.27□□□□□ -1.89
SUB1P54000 YCT1YLL055W 1596 nt3.27□□□□□ -1.89
SUB1P54000 COG3YER157W 2406 nt3.27□□□□□ -1.89
SUB1P54000 AMS1YGL156W 3252 nt3.27□□□□□ -1.89
SUB1P54000 YCR100CYCR100C 951 nt3.27□□□□□ -1.89
SUB1P54000 ATP16YDL004W 483 nt3.27□□□□□ -1.89
SUB1P54000 MTM1YGR257C 1101 nt3.27□□□□□ -1.89
SUB1P54000 SFG1YOR315W 1041 nt3.27□□□□□ -1.89
SUB1P54000 YDR239CYDR239C 2364 nt3.27□□□□□ -1.89
SUB1P54000 KRE33YNL132W 3171 nt3.26□□□□□ -1.89
SUB1P54000 MFB1YDR219C 1398 nt3.26□□□□□ -1.89
SUB1P54000 FUN30YAL019W 3396 nt3.26□□□□□ -1.89
SUB1P54000 GPI13YLL031C 3054 nt3.26□□□□□ -1.89
SUB1P54000 UBP16YPL072W 1500 nt3.26□□□□□ -1.89
SUB1P54000 YCR090CYCR090C 549 nt3.26□□□□□ -1.89
SUB1P54000 YGR053CYGR053C 852 nt3.26□□□□□ -1.89
SUB1P54000 EST3YIL009C-A 546 nt3.26□□□□□ -1.89
SUB1P54000 YJL156W-AYJL156W-A 222 nt3.26□□□□□ -1.89
SUB1P54000 YJR020WYJR020W 333 nt3.26□□□□□ -1.89
SUB1P54000 RGM1YMR182C 636 nt3.26□□□□□ -1.89
SUB1P54000 CBP6YBR120C 489 nt3.26□□□□□ -1.89
SUB1P54000 ILS1YBL076C 3219 nt3.26□□□□□ -1.89
SUB1P54000 YKU80YMR106C 1890 nt3.26□□□□□ -1.89
SUB1P54000 BFR1YOR198C 1413 nt3.26□□□□□ -1.89
SUB1P54000 NEL1YHR035W 1893 nt3.25□□□□□ -1.89
SUB1P54000 YCR085WYCR085W 354 nt3.25□□□□□ -1.89
SUB1P54000 ENT5YDR153C 1236 nt3.25□□□□□ -1.89
SUB1P54000 YDR209CYDR209C 414 nt3.25□□□□□ -1.89
SUB1P54000 YIP5YGL161C 933 nt3.25□□□□□ -1.89
SUB1P54000 THG1YGR024C 714 nt3.25□□□□□ -1.89
SUB1P54000 YJL202CYJL202C 348 nt3.25□□□□□ -1.89
SUB1P54000 ECM4YKR076W 1113 nt3.25□□□□□ -1.89
SUB1P54000 RPL36AYMR194W 303 nt3.25□□□□□ -1.89
SUB1P54000 ESF2YNR054C 951 nt3.25□□□□□ -1.89
SUB1P54000 HUT1YPL244C 1020 nt3.25□□□□□ -1.89
SUB1P54000 ICR1ICR1 3199 nt3.25□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 70.8 ms