Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.33■□□□□ 0.85
SNAP47Q5SQN1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNAP47Q5SQN1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SNAP47Q5SQN1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNAP47Q5SQN1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.33■□□□□ 0.84
SNAP47Q5SQN1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNAP47Q5SQN1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 AL138781.1-201ENST00000566567 1274 ntBASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 AC013268.1-206ENST00000638368 961 ntBASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 AC112229.1-201ENST00000639295 961 ntBASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNAP47Q5SQN1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 AL117328.2-201ENST00000624617 1940 ntBASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.31■□□□□ 0.84
SNAP47Q5SQN1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 AC092053.2-201ENST00000640557 1818 ntBASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNAP47Q5SQN1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 AC003102.1-202ENST00000563394 1796 ntBASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 GUSBP6-202ENST00000438529 1198 ntBASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 SLC7A5P1-201ENST00000568957 537 ntBASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.29■□□□□ 0.84
SNAP47Q5SQN1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 POU5F1P4-201ENST00000413175 1085 ntBASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SNAP47Q5SQN1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms