Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 BX276092.2-201ENST00000417668 665 ntBASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 AL162412.1-201ENST00000567129 965 ntBASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TBC1D3FA6NER0 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 TMEM191A-211ENST00000637163 1067 ntBASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.92■□□□□ 0.94
TBC1D3FA6NER0 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TBC1D3FA6NER0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 C11orf96-202ENST00000528572 1834 ntBASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 RARRES2P4-201ENST00000514074 484 ntBASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.9■□□□□ 0.94
TBC1D3FA6NER0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TBC1D3FA6NER0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3FA6NER0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
TBC1D3FA6NER0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3FA6NER0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.89■□□□□ 0.93
TBC1D3FA6NER0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
TBC1D3FA6NER0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.89■□□□□ 0.93
TBC1D3FA6NER0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TBC1D3FA6NER0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 AC133561.1-201ENST00000568600 2415 ntBASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 AC010980.2-201ENST00000587099 1412 ntBASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 AC245052.3-201ENST00000450182 901 ntBASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TBC1D3FA6NER0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.87■□□□□ 0.93
TBC1D3FA6NER0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms