Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
Pcdh15Q99PJ1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Pcdh15Q99PJ1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Pcdh15Q99PJ1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
Pcdh15Q99PJ1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdh15Q99PJ1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Pcdh15Q99PJ1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.71■■■□□ 2.35
Pcdh15Q99PJ1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.7■■■□□ 2.35
Pcdh15Q99PJ1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Pcdh15Q99PJ1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
Pcdh15Q99PJ1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.69■■■□□ 2.34
Pcdh15Q99PJ1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Pcdh15Q99PJ1 Gm11175-201ENSMUST00000116172 543 ntBASIC29.66■■■□□ 2.34
Pcdh15Q99PJ1 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pcdh15Q99PJ1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pcdh15Q99PJ1 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC29.65■■■□□ 2.34
Pcdh15Q99PJ1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Pcdh15Q99PJ1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Pcdh15Q99PJ1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pcdh15Q99PJ1 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Pcdh15Q99PJ1 Gm11599-201ENSMUST00000118720 878 ntBASIC29.62■■■□□ 2.33
Pcdh15Q99PJ1 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Pcdh15Q99PJ1 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Pcdh15Q99PJ1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Pcdh15Q99PJ1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.59■■■□□ 2.33
Pcdh15Q99PJ1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.58■■■□□ 2.33
Pcdh15Q99PJ1 Mir6538-201ENSMUST00000183713 110 ntBASIC29.58■■■□□ 2.33
Pcdh15Q99PJ1 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Pcdh15Q99PJ1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
Pcdh15Q99PJ1 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Pcdh15Q99PJ1 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
Pcdh15Q99PJ1 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Pcdh15Q99PJ1 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Pcdh15Q99PJ1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Pcdh15Q99PJ1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.54■■■□□ 2.32
Pcdh15Q99PJ1 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC29.53■■■□□ 2.32
Pcdh15Q99PJ1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Pcdh15Q99PJ1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Pcdh15Q99PJ1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
Pcdh15Q99PJ1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Pcdh15Q99PJ1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Pcdh15Q99PJ1 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Pcdh15Q99PJ1 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
Pcdh15Q99PJ1 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
Pcdh15Q99PJ1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Pcdh15Q99PJ1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Pcdh15Q99PJ1 Gm30346-201ENSMUST00000218641 1699 ntBASIC29.48■■■□□ 2.31
Pcdh15Q99PJ1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Pcdh15Q99PJ1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Pcdh15Q99PJ1 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
Pcdh15Q99PJ1 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC29.45■■■□□ 2.3
Pcdh15Q99PJ1 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
Pcdh15Q99PJ1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.43■■■□□ 2.3
Pcdh15Q99PJ1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.43■■■□□ 2.3
Pcdh15Q99PJ1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC29.43■■■□□ 2.3
Pcdh15Q99PJ1 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pcdh15Q99PJ1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Pcdh15Q99PJ1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.4■■■□□ 2.3
Pcdh15Q99PJ1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC29.4■■■□□ 2.3
Pcdh15Q99PJ1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.39■■■□□ 2.3
Pcdh15Q99PJ1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Pcdh15Q99PJ1 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Pcdh15Q99PJ1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdh15Q99PJ1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdh15Q99PJ1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
Pcdh15Q99PJ1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
Pcdh15Q99PJ1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.35■■■□□ 2.29
Pcdh15Q99PJ1 Cap2-205ENSMUST00000225824 1634 ntBASIC29.33■■■□□ 2.29
Pcdh15Q99PJ1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdh15Q99PJ1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC29.32■■■□□ 2.28
Pcdh15Q99PJ1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Pcdh15Q99PJ1 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
Pcdh15Q99PJ1 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
Pcdh15Q99PJ1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
Pcdh15Q99PJ1 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
Pcdh15Q99PJ1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC29.3■■■□□ 2.28
Pcdh15Q99PJ1 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pcdh15Q99PJ1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pcdh15Q99PJ1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.29■■■□□ 2.28
Pcdh15Q99PJ1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Pcdh15Q99PJ1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Pcdh15Q99PJ1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.25■■■□□ 2.27
Pcdh15Q99PJ1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Pcdh15Q99PJ1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdh15Q99PJ1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.22■■■□□ 2.27
Pcdh15Q99PJ1 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pcdh15Q99PJ1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.2■■■□□ 2.26
Pcdh15Q99PJ1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pcdh15Q99PJ1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.18■■■□□ 2.26
Pcdh15Q99PJ1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.18■■■□□ 2.26
Pcdh15Q99PJ1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pcdh15Q99PJ1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.16■■■□□ 2.26
Pcdh15Q99PJ1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdh15Q99PJ1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdh15Q99PJ1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pcdh15Q99PJ1 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pcdh15Q99PJ1 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.14■■■□□ 2.26
Pcdh15Q99PJ1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Pcdh15Q99PJ1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdh15Q99PJ1 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 148.1 ms