Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Col23a1Q8K4G2 Mir6538-201ENSMUST00000183713 110 ntBASIC31.68■■■□□ 2.66
Col23a1Q8K4G2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.68■■■□□ 2.66
Col23a1Q8K4G2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Col23a1Q8K4G2 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Col23a1Q8K4G2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Col23a1Q8K4G2 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Col23a1Q8K4G2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.64■■■□□ 2.66
Col23a1Q8K4G2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Col23a1Q8K4G2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
Col23a1Q8K4G2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Col23a1Q8K4G2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
Col23a1Q8K4G2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Col23a1Q8K4G2 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Col23a1Q8K4G2 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC31.58■■■□□ 2.65
Col23a1Q8K4G2 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Col23a1Q8K4G2 Cap2-205ENSMUST00000225824 1634 ntBASIC31.57■■■□□ 2.64
Col23a1Q8K4G2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC31.57■■■□□ 2.64
Col23a1Q8K4G2 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC31.57■■■□□ 2.64
Col23a1Q8K4G2 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC31.56■■■□□ 2.64
Col23a1Q8K4G2 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
Col23a1Q8K4G2 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.54■■■□□ 2.64
Col23a1Q8K4G2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Col23a1Q8K4G2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Col23a1Q8K4G2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC31.52■■■□□ 2.64
Col23a1Q8K4G2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Col23a1Q8K4G2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Col23a1Q8K4G2 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
Col23a1Q8K4G2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Col23a1Q8K4G2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC31.48■■■□□ 2.63
Col23a1Q8K4G2 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Col23a1Q8K4G2 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Col23a1Q8K4G2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Col23a1Q8K4G2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Col23a1Q8K4G2 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Col23a1Q8K4G2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC31.43■■■□□ 2.62
Col23a1Q8K4G2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Col23a1Q8K4G2 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Col23a1Q8K4G2 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Col23a1Q8K4G2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Col23a1Q8K4G2 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
Col23a1Q8K4G2 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Col23a1Q8K4G2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.4■■■□□ 2.62
Col23a1Q8K4G2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Col23a1Q8K4G2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Col23a1Q8K4G2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.38■■■□□ 2.61
Col23a1Q8K4G2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC31.38■■■□□ 2.61
Col23a1Q8K4G2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
Col23a1Q8K4G2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Col23a1Q8K4G2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC31.36■■■□□ 2.61
Col23a1Q8K4G2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Col23a1Q8K4G2 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Col23a1Q8K4G2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Col23a1Q8K4G2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
Col23a1Q8K4G2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Col23a1Q8K4G2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
Col23a1Q8K4G2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.35■■■□□ 2.61
Col23a1Q8K4G2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.33■■■□□ 2.61
Col23a1Q8K4G2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.33■■■□□ 2.61
Col23a1Q8K4G2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.32■■■□□ 2.6
Col23a1Q8K4G2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Col23a1Q8K4G2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Col23a1Q8K4G2 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Col23a1Q8K4G2 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col23a1Q8K4G2 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Col23a1Q8K4G2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Col23a1Q8K4G2 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Col23a1Q8K4G2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC31.25■■■□□ 2.59
Col23a1Q8K4G2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col23a1Q8K4G2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Col23a1Q8K4G2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
Col23a1Q8K4G2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
Col23a1Q8K4G2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Col23a1Q8K4G2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Col23a1Q8K4G2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Col23a1Q8K4G2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC31.2■■■□□ 2.59
Col23a1Q8K4G2 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col23a1Q8K4G2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
Col23a1Q8K4G2 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Col23a1Q8K4G2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.16■■■□□ 2.58
Col23a1Q8K4G2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Col23a1Q8K4G2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.57
Col23a1Q8K4G2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC31.13■■■□□ 2.57
Col23a1Q8K4G2 Gm30346-201ENSMUST00000218641 1699 ntBASIC31.12■■■□□ 2.57
Col23a1Q8K4G2 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Col23a1Q8K4G2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Col23a1Q8K4G2 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC31.1■■■□□ 2.57
Col23a1Q8K4G2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.1■■■□□ 2.57
Col23a1Q8K4G2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Col23a1Q8K4G2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
Col23a1Q8K4G2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Col23a1Q8K4G2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC31.08■■■□□ 2.57
Col23a1Q8K4G2 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Col23a1Q8K4G2 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC31.07■■■□□ 2.56
Col23a1Q8K4G2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC31.06■■■□□ 2.56
Col23a1Q8K4G2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.06■■■□□ 2.56
Col23a1Q8K4G2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Col23a1Q8K4G2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Col23a1Q8K4G2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Col23a1Q8K4G2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms