Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Mir6538-201ENSMUST00000183713 110 ntBASIC28.06■■■□□ 2.08
Zswim3Q8CFL8 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Zswim3Q8CFL8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zswim3Q8CFL8 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zswim3Q8CFL8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Zswim3Q8CFL8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Zswim3Q8CFL8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Zswim3Q8CFL8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
Zswim3Q8CFL8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.01■■■□□ 2.07
Zswim3Q8CFL8 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC28■■■□□ 2.07
Zswim3Q8CFL8 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Zswim3Q8CFL8 Gm11175-201ENSMUST00000116172 543 ntBASIC27.98■■■□□ 2.07
Zswim3Q8CFL8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.98■■■□□ 2.07
Zswim3Q8CFL8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Zswim3Q8CFL8 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Zswim3Q8CFL8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Zswim3Q8CFL8 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Zswim3Q8CFL8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Zswim3Q8CFL8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Zswim3Q8CFL8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC27.94■■■□□ 2.06
Zswim3Q8CFL8 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27.92■■■□□ 2.06
Zswim3Q8CFL8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Zswim3Q8CFL8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Zswim3Q8CFL8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
Zswim3Q8CFL8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.92■■■□□ 2.06
Zswim3Q8CFL8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Zswim3Q8CFL8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Zswim3Q8CFL8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Zswim3Q8CFL8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Zswim3Q8CFL8 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC27.88■■■□□ 2.05
Zswim3Q8CFL8 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Zswim3Q8CFL8 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.87■■■□□ 2.05
Zswim3Q8CFL8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Zswim3Q8CFL8 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC27.87■■■□□ 2.05
Zswim3Q8CFL8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.87■■■□□ 2.05
Zswim3Q8CFL8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Zswim3Q8CFL8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC27.87■■■□□ 2.05
Zswim3Q8CFL8 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Zswim3Q8CFL8 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Zswim3Q8CFL8 Cap2-205ENSMUST00000225824 1634 ntBASIC27.83■■■□□ 2.05
Zswim3Q8CFL8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Zswim3Q8CFL8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC27.82■■■□□ 2.04
Zswim3Q8CFL8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Zswim3Q8CFL8 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Zswim3Q8CFL8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Zswim3Q8CFL8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
Zswim3Q8CFL8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Zswim3Q8CFL8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Zswim3Q8CFL8 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Zswim3Q8CFL8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC27.77■■■□□ 2.04
Zswim3Q8CFL8 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Zswim3Q8CFL8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Zswim3Q8CFL8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Zswim3Q8CFL8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
Zswim3Q8CFL8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Zswim3Q8CFL8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC27.74■■■□□ 2.03
Zswim3Q8CFL8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC27.74■■■□□ 2.03
Zswim3Q8CFL8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Zswim3Q8CFL8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
Zswim3Q8CFL8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Zswim3Q8CFL8 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Zswim3Q8CFL8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Zswim3Q8CFL8 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.03
Zswim3Q8CFL8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.7■■■□□ 2.02
Zswim3Q8CFL8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.7■■■□□ 2.02
Zswim3Q8CFL8 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Zswim3Q8CFL8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Zswim3Q8CFL8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC27.68■■■□□ 2.02
Zswim3Q8CFL8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Zswim3Q8CFL8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC27.67■■■□□ 2.02
Zswim3Q8CFL8 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Zswim3Q8CFL8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC27.66■■■□□ 2.02
Zswim3Q8CFL8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Zswim3Q8CFL8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Zswim3Q8CFL8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.64■■■□□ 2.02
Zswim3Q8CFL8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Zswim3Q8CFL8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
Zswim3Q8CFL8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC27.62■■■□□ 2.01
Zswim3Q8CFL8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
Zswim3Q8CFL8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.61■■■□□ 2.01
Zswim3Q8CFL8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC27.61■■■□□ 2.01
Zswim3Q8CFL8 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Zswim3Q8CFL8 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC27.59■■■□□ 2.01
Zswim3Q8CFL8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Zswim3Q8CFL8 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.57■■■□□ 2
Zswim3Q8CFL8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.57■■■□□ 2
Zswim3Q8CFL8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.56■■■□□ 2
Zswim3Q8CFL8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Zswim3Q8CFL8 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Zswim3Q8CFL8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Zswim3Q8CFL8 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Zswim3Q8CFL8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC27.52■■■□□ 2
Zswim3Q8CFL8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.52■■■□□ 2
Zswim3Q8CFL8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.52■■■□□ 2
Zswim3Q8CFL8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC27.52■■■□□ 2
Zswim3Q8CFL8 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
Zswim3Q8CFL8 Gm30346-201ENSMUST00000218641 1699 ntBASIC27.52■■■□□ 2
Zswim3Q8CFL8 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Zswim3Q8CFL8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC27.49■■□□□ 1.99
Zswim3Q8CFL8 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms