Protein–RNA interactions for Protein: Q80T79

Csmd3, CUB and sushi domain-containing protein 3, mousemouse

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csmd3Q80T79 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Csmd3Q80T79 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Csmd3Q80T79 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Csmd3Q80T79 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Csmd3Q80T79 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Csmd3Q80T79 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Csmd3Q80T79 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Csmd3Q80T79 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Csmd3Q80T79 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Csmd3Q80T79 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Csmd3Q80T79 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Csmd3Q80T79 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Csmd3Q80T79 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Csmd3Q80T79 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Csmd3Q80T79 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Csmd3Q80T79 Nkain2-201ENSMUST00000092602 558 ntBASIC17.65■□□□□ 0.42
Csmd3Q80T79 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Csmd3Q80T79 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Csmd3Q80T79 Cap2-205ENSMUST00000225824 1634 ntBASIC17.65■□□□□ 0.42
Csmd3Q80T79 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
Csmd3Q80T79 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Csmd3Q80T79 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Csmd3Q80T79 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Csmd3Q80T79 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csmd3Q80T79 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Csmd3Q80T79 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csmd3Q80T79 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Csmd3Q80T79 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csmd3Q80T79 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.61■□□□□ 0.41
Csmd3Q80T79 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Csmd3Q80T79 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csmd3Q80T79 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Csmd3Q80T79 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC17.6■□□□□ 0.41
Csmd3Q80T79 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Csmd3Q80T79 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Csmd3Q80T79 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.59■□□□□ 0.41
Csmd3Q80T79 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Csmd3Q80T79 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
Csmd3Q80T79 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Csmd3Q80T79 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Csmd3Q80T79 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.57■□□□□ 0.4
Csmd3Q80T79 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Csmd3Q80T79 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Csmd3Q80T79 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Csmd3Q80T79 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Csmd3Q80T79 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Csmd3Q80T79 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC17.55■□□□□ 0.4
Csmd3Q80T79 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Csmd3Q80T79 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Csmd3Q80T79 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Csmd3Q80T79 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Csmd3Q80T79 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Csmd3Q80T79 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Csmd3Q80T79 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csmd3Q80T79 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Csmd3Q80T79 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Csmd3Q80T79 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csmd3Q80T79 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csmd3Q80T79 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Csmd3Q80T79 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Csmd3Q80T79 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Csmd3Q80T79 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Csmd3Q80T79 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Csmd3Q80T79 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.49■□□□□ 0.39
Csmd3Q80T79 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Csmd3Q80T79 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Csmd3Q80T79 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.46■□□□□ 0.39
Csmd3Q80T79 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Csmd3Q80T79 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC17.45■□□□□ 0.38
Csmd3Q80T79 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Csmd3Q80T79 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Csmd3Q80T79 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.45■□□□□ 0.38
Csmd3Q80T79 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.45■□□□□ 0.38
Csmd3Q80T79 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC17.44■□□□□ 0.38
Csmd3Q80T79 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
Csmd3Q80T79 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Csmd3Q80T79 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Csmd3Q80T79 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Csmd3Q80T79 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.42■□□□□ 0.38
Csmd3Q80T79 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Csmd3Q80T79 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Csmd3Q80T79 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Csmd3Q80T79 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Csmd3Q80T79 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Csmd3Q80T79 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Csmd3Q80T79 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Csmd3Q80T79 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Csmd3Q80T79 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.4■□□□□ 0.38
Csmd3Q80T79 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Csmd3Q80T79 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.38■□□□□ 0.37
Csmd3Q80T79 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Csmd3Q80T79 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.37■□□□□ 0.37
Csmd3Q80T79 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Csmd3Q80T79 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Csmd3Q80T79 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
Csmd3Q80T79 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Csmd3Q80T79 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Csmd3Q80T79 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC17.34■□□□□ 0.37
Csmd3Q80T79 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Csmd3Q80T79 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.33■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms