Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm11175-201ENSMUST00000116172 543 ntBASIC37.69■■■■□ 3.62
Ptch1Q61115 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC37.68■■■■□ 3.62
Ptch1Q61115 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC37.68■■■■□ 3.62
Ptch1Q61115 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC37.68■■■■□ 3.62
Ptch1Q61115 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Ptch1Q61115 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC37.67■■■■□ 3.62
Ptch1Q61115 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
Ptch1Q61115 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC37.64■■■■□ 3.62
Ptch1Q61115 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC37.64■■■■□ 3.62
Ptch1Q61115 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC37.63■■■■□ 3.61
Ptch1Q61115 Gm11599-201ENSMUST00000118720 878 ntBASIC37.63■■■■□ 3.61
Ptch1Q61115 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC37.63■■■■□ 3.61
Ptch1Q61115 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Ptch1Q61115 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC37.62■■■■□ 3.61
Ptch1Q61115 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC37.61■■■■□ 3.61
Ptch1Q61115 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC37.6■■■■□ 3.61
Ptch1Q61115 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Ptch1Q61115 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
Ptch1Q61115 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
Ptch1Q61115 Mir6538-201ENSMUST00000183713 110 ntBASIC37.58■■■■□ 3.61
Ptch1Q61115 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC37.58■■■■□ 3.61
Ptch1Q61115 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
Ptch1Q61115 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC37.57■■■■□ 3.6
Ptch1Q61115 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC37.57■■■■□ 3.6
Ptch1Q61115 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC37.57■■■■□ 3.6
Ptch1Q61115 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC37.57■■■■□ 3.6
Ptch1Q61115 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
Ptch1Q61115 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC37.55■■■■□ 3.6
Ptch1Q61115 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC37.52■■■■□ 3.6
Ptch1Q61115 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC37.5■■■■□ 3.59
Ptch1Q61115 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
Ptch1Q61115 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
Ptch1Q61115 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
Ptch1Q61115 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
Ptch1Q61115 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC37.45■■■■□ 3.59
Ptch1Q61115 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC37.45■■■■□ 3.59
Ptch1Q61115 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC37.44■■■■□ 3.58
Ptch1Q61115 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
Ptch1Q61115 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC37.43■■■■□ 3.58
Ptch1Q61115 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC37.43■■■■□ 3.58
Ptch1Q61115 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC37.43■■■■□ 3.58
Ptch1Q61115 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
Ptch1Q61115 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC37.4■■■■□ 3.58
Ptch1Q61115 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
Ptch1Q61115 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
Ptch1Q61115 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC37.37■■■■□ 3.57
Ptch1Q61115 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
Ptch1Q61115 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC37.37■■■■□ 3.57
Ptch1Q61115 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC37.36■■■■□ 3.57
Ptch1Q61115 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC37.36■■■■□ 3.57
Ptch1Q61115 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
Ptch1Q61115 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Ptch1Q61115 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC37.35■■■■□ 3.57
Ptch1Q61115 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC37.34■■■■□ 3.57
Ptch1Q61115 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC37.31■■■■□ 3.56
Ptch1Q61115 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC37.31■■■■□ 3.56
Ptch1Q61115 Cap2-205ENSMUST00000225824 1634 ntBASIC37.31■■■■□ 3.56
Ptch1Q61115 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC37.27■■■■□ 3.56
Ptch1Q61115 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC37.27■■■■□ 3.56
Ptch1Q61115 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC37.27■■■■□ 3.56
Ptch1Q61115 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC37.27■■■■□ 3.56
Ptch1Q61115 Gm30346-201ENSMUST00000218641 1699 ntBASIC37.27■■■■□ 3.56
Ptch1Q61115 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC37.27■■■■□ 3.56
Ptch1Q61115 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC37.26■■■■□ 3.55
Ptch1Q61115 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC37.26■■■■□ 3.55
Ptch1Q61115 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC37.25■■■■□ 3.55
Ptch1Q61115 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC37.24■■■■□ 3.55
Ptch1Q61115 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC37.22■■■■□ 3.55
Ptch1Q61115 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC37.21■■■■□ 3.55
Ptch1Q61115 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
Ptch1Q61115 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC37.21■■■■□ 3.55
Ptch1Q61115 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC37.2■■■■□ 3.55
Ptch1Q61115 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC37.2■■■■□ 3.55
Ptch1Q61115 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC37.19■■■■□ 3.54
Ptch1Q61115 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC37.19■■■■□ 3.54
Ptch1Q61115 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC37.19■■■■□ 3.54
Ptch1Q61115 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC37.15■■■■□ 3.54
Ptch1Q61115 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC37.13■■■■□ 3.53
Ptch1Q61115 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Ptch1Q61115 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
Ptch1Q61115 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC37.1■■■■□ 3.53
Ptch1Q61115 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC37.07■■■■□ 3.53
Ptch1Q61115 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC37.07■■■■□ 3.52
Ptch1Q61115 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC37.06■■■■□ 3.52
Ptch1Q61115 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC37.06■■■■□ 3.52
Ptch1Q61115 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC37.06■■■■□ 3.52
Ptch1Q61115 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC37.03■■■■□ 3.52
Ptch1Q61115 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC37.01■■■■□ 3.51
Ptch1Q61115 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC37.01■■■■□ 3.51
Ptch1Q61115 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC37■■■■□ 3.51
Ptch1Q61115 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC36.99■■■■□ 3.51
Ptch1Q61115 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC36.98■■■■□ 3.51
Ptch1Q61115 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Ptch1Q61115 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC36.97■■■■□ 3.51
Ptch1Q61115 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC36.97■■■■□ 3.51
Ptch1Q61115 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC36.96■■■■□ 3.51
Ptch1Q61115 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC36.96■■■■□ 3.51
Ptch1Q61115 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC36.95■■■■□ 3.51
Ptch1Q61115 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
Ptch1Q61115 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms