Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Urb1Q571H0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Urb1Q571H0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Urb1Q571H0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Urb1Q571H0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Urb1Q571H0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Urb1Q571H0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Urb1Q571H0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Urb1Q571H0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Urb1Q571H0 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.08■■□□□ 1.29
Urb1Q571H0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Urb1Q571H0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Urb1Q571H0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Urb1Q571H0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Urb1Q571H0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Urb1Q571H0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Urb1Q571H0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Urb1Q571H0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.05■■□□□ 1.28
Urb1Q571H0 Gm11599-201ENSMUST00000118720 878 ntBASIC23.05■■□□□ 1.28
Urb1Q571H0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Urb1Q571H0 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.03■■□□□ 1.28
Urb1Q571H0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.03■■□□□ 1.28
Urb1Q571H0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Urb1Q571H0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.03■■□□□ 1.28
Urb1Q571H0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Urb1Q571H0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Urb1Q571H0 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Urb1Q571H0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Urb1Q571H0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
Urb1Q571H0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23■■□□□ 1.27
Urb1Q571H0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23■■□□□ 1.27
Urb1Q571H0 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Urb1Q571H0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Urb1Q571H0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Urb1Q571H0 Nkain2-201ENSMUST00000092602 558 ntBASIC22.98■■□□□ 1.27
Urb1Q571H0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Urb1Q571H0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Urb1Q571H0 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Urb1Q571H0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Urb1Q571H0 Gm11175-201ENSMUST00000116172 543 ntBASIC22.97■■□□□ 1.27
Urb1Q571H0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.97■■□□□ 1.27
Urb1Q571H0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Urb1Q571H0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Urb1Q571H0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Urb1Q571H0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Urb1Q571H0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Urb1Q571H0 Gm30346-201ENSMUST00000218641 1699 ntBASIC22.93■■□□□ 1.26
Urb1Q571H0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Urb1Q571H0 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
Urb1Q571H0 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Urb1Q571H0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC22.91■■□□□ 1.26
Urb1Q571H0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Urb1Q571H0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Urb1Q571H0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Urb1Q571H0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Urb1Q571H0 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Urb1Q571H0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Urb1Q571H0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Urb1Q571H0 Mir6538-201ENSMUST00000183713 110 ntBASIC22.88■■□□□ 1.25
Urb1Q571H0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.88■■□□□ 1.25
Urb1Q571H0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Urb1Q571H0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
Urb1Q571H0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Urb1Q571H0 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Urb1Q571H0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.85■■□□□ 1.25
Urb1Q571H0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Urb1Q571H0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Urb1Q571H0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Urb1Q571H0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Urb1Q571H0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Urb1Q571H0 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Urb1Q571H0 Cap2-205ENSMUST00000225824 1634 ntBASIC22.81■■□□□ 1.24
Urb1Q571H0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Urb1Q571H0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Urb1Q571H0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.8■■□□□ 1.24
Urb1Q571H0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Urb1Q571H0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Urb1Q571H0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.76■■□□□ 1.23
Urb1Q571H0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Urb1Q571H0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Urb1Q571H0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.76■■□□□ 1.23
Urb1Q571H0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Urb1Q571H0 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.75■■□□□ 1.23
Urb1Q571H0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Urb1Q571H0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Urb1Q571H0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Urb1Q571H0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Urb1Q571H0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Urb1Q571H0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Urb1Q571H0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Urb1Q571H0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Urb1Q571H0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.7■■□□□ 1.22
Urb1Q571H0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Urb1Q571H0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Urb1Q571H0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC22.69■■□□□ 1.22
Urb1Q571H0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Urb1Q571H0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.67■■□□□ 1.22
Urb1Q571H0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Urb1Q571H0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Urb1Q571H0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.64■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms