Protein–RNA interactions for Protein: Q3TYP4

Tmem88b, Transmembrane protein 88B, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem88bQ3TYP4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.76■□□□□ 0.91
Tmem88bQ3TYP4 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem88bQ3TYP4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.75■□□□□ 0.91
Tmem88bQ3TYP4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tmem88bQ3TYP4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Tmem88bQ3TYP4 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
Tmem88bQ3TYP4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Tmem88bQ3TYP4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem88bQ3TYP4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tmem88bQ3TYP4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Tmem88bQ3TYP4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tmem88bQ3TYP4 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tmem88bQ3TYP4 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tmem88bQ3TYP4 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.69■□□□□ 0.9
Tmem88bQ3TYP4 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.69■□□□□ 0.9
Tmem88bQ3TYP4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem88bQ3TYP4 Gm11599-201ENSMUST00000118720 878 ntBASIC20.68■□□□□ 0.9
Tmem88bQ3TYP4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem88bQ3TYP4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem88bQ3TYP4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tmem88bQ3TYP4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem88bQ3TYP4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.67■□□□□ 0.9
Tmem88bQ3TYP4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem88bQ3TYP4 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tmem88bQ3TYP4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem88bQ3TYP4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem88bQ3TYP4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem88bQ3TYP4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Tmem88bQ3TYP4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tmem88bQ3TYP4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tmem88bQ3TYP4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.65■□□□□ 0.9
Tmem88bQ3TYP4 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem88bQ3TYP4 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem88bQ3TYP4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tmem88bQ3TYP4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem88bQ3TYP4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Tmem88bQ3TYP4 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Tmem88bQ3TYP4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tmem88bQ3TYP4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.59■□□□□ 0.89
Tmem88bQ3TYP4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tmem88bQ3TYP4 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Tmem88bQ3TYP4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.58■□□□□ 0.89
Tmem88bQ3TYP4 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.58■□□□□ 0.89
Tmem88bQ3TYP4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.57■□□□□ 0.88
Tmem88bQ3TYP4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.57■□□□□ 0.88
Tmem88bQ3TYP4 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tmem88bQ3TYP4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tmem88bQ3TYP4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem88bQ3TYP4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tmem88bQ3TYP4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem88bQ3TYP4 Mir6538-201ENSMUST00000183713 110 ntBASIC20.55■□□□□ 0.88
Tmem88bQ3TYP4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tmem88bQ3TYP4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem88bQ3TYP4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmem88bQ3TYP4 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmem88bQ3TYP4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem88bQ3TYP4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmem88bQ3TYP4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Tmem88bQ3TYP4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tmem88bQ3TYP4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem88bQ3TYP4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmem88bQ3TYP4 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem88bQ3TYP4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmem88bQ3TYP4 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem88bQ3TYP4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tmem88bQ3TYP4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Tmem88bQ3TYP4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tmem88bQ3TYP4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Tmem88bQ3TYP4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem88bQ3TYP4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem88bQ3TYP4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tmem88bQ3TYP4 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tmem88bQ3TYP4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.45■□□□□ 0.86
Tmem88bQ3TYP4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.44■□□□□ 0.86
Tmem88bQ3TYP4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Tmem88bQ3TYP4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Tmem88bQ3TYP4 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tmem88bQ3TYP4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Tmem88bQ3TYP4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.42■□□□□ 0.86
Tmem88bQ3TYP4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem88bQ3TYP4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tmem88bQ3TYP4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tmem88bQ3TYP4 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.41■□□□□ 0.86
Tmem88bQ3TYP4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem88bQ3TYP4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem88bQ3TYP4 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tmem88bQ3TYP4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tmem88bQ3TYP4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem88bQ3TYP4 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem88bQ3TYP4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.39■□□□□ 0.85
Tmem88bQ3TYP4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.39■□□□□ 0.85
Tmem88bQ3TYP4 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem88bQ3TYP4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tmem88bQ3TYP4 Gm30346-201ENSMUST00000218641 1699 ntBASIC20.38■□□□□ 0.85
Tmem88bQ3TYP4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem88bQ3TYP4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem88bQ3TYP4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tmem88bQ3TYP4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tmem88bQ3TYP4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.37■□□□□ 0.85
Tmem88bQ3TYP4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms