Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 THI72YOR192C 1800 nt9.37□□□□□ -0.91
PDH1Q12428 CSM1YCR086W 573 nt9.35□□□□□ -0.91
PDH1Q12428 SNF1YDR477W 1902 nt9.34□□□□□ -0.91
PDH1Q12428 PRM5YIL117C 957 nt9.33□□□□□ -0.92
PDH1Q12428 YPL251WYPL251W 303 nt9.33□□□□□ -0.92
PDH1Q12428 LSB5YCL034W 1065 nt9.33□□□□□ -0.92
PDH1Q12428 MEP3YPR138C 1470 nt9.32□□□□□ -0.92
PDH1Q12428 GAL3YDR009W 1563 nt9.3□□□□□ -0.92
PDH1Q12428 YJL118WYJL118W 660 nt9.3□□□□□ -0.92
PDH1Q12428 RIB1YBL033C 1038 nt9.3□□□□□ -0.92
PDH1Q12428 PAR32YDL173W 888 nt9.29□□□□□ -0.92
PDH1Q12428 YMR103CYMR103C 363 nt9.29□□□□□ -0.92
PDH1Q12428 YMR262WYMR262W 942 nt9.29□□□□□ -0.92
PDH1Q12428 TIP1YBR067C 633 nt9.29□□□□□ -0.92
PDH1Q12428 RIB7YBR153W 735 nt9.29□□□□□ -0.92
PDH1Q12428 BRR1YPR057W 1026 nt9.28□□□□□ -0.92
PDH1Q12428 BIO5YNR056C 1686 nt9.28□□□□□ -0.92
PDH1Q12428 RPT5YOR117W 1305 nt9.27□□□□□ -0.93
PDH1Q12428 LEU9YOR108W 1815 nt9.26□□□□□ -0.93
PDH1Q12428 DBP1YPL119C 1854 nt9.26□□□□□ -0.93
PDH1Q12428 IRC24YIR036C 792 nt9.26□□□□□ -0.93
PDH1Q12428 YBL086CYBL086C 1401 nt9.25□□□□□ -0.93
PDH1Q12428 NUC1YJL208C 990 nt9.25□□□□□ -0.93
PDH1Q12428 TOA2YKL058W 369 nt9.24□□□□□ -0.93
PDH1Q12428 ERG6YML008C 1152 nt9.24□□□□□ -0.93
PDH1Q12428 GSF2YML048W 1212 nt9.24□□□□□ -0.93
PDH1Q12428 HXT1YHR094C 1713 nt9.24□□□□□ -0.93
PDH1Q12428 YIA6YIL006W 1122 nt9.23□□□□□ -0.93
PDH1Q12428 MHF1YOL086W-A 273 nt9.23□□□□□ -0.93
PDH1Q12428 MCH5YOR306C 1566 nt9.23□□□□□ -0.93
PDH1Q12428 SOD2YHR008C 702 nt9.22□□□□□ -0.93
PDH1Q12428 POT1YIL160C 1254 nt9.22□□□□□ -0.93
PDH1Q12428 SNZ1YMR096W 894 nt9.22□□□□□ -0.93
PDH1Q12428 TUB4YLR212C 1422 nt9.22□□□□□ -0.93
PDH1Q12428 HIF1YLL022C 1158 nt9.21□□□□□ -0.94
PDH1Q12428 PHO23YNL097C 993 nt9.21□□□□□ -0.94
PDH1Q12428 SAM3YPL274W 1764 nt9.2□□□□□ -0.94
PDH1Q12428 BNI5YNL166C 1347 nt9.19□□□□□ -0.94
PDH1Q12428 GND2YGR256W 1479 nt9.17□□□□□ -0.94
PDH1Q12428 YPR126CYPR126C 309 nt9.17□□□□□ -0.94
PDH1Q12428 NAR1YNL240C 1476 nt9.16□□□□□ -0.94
PDH1Q12428 TRT2tT(CGU)K 72 nt9.16□□□□□ -0.94
PDH1Q12428 MSC1YML128C 1542 nt9.15□□□□□ -0.94
PDH1Q12428 CTI6YPL181W 1521 nt9.14□□□□□ -0.95
PDH1Q12428 PBP1YGR178C 2169 nt9.13□□□□□ -0.95
PDH1Q12428 APS2YJR058C 444 nt9.13□□□□□ -0.95
PDH1Q12428 IML3YBR107C 738 nt9.13□□□□□ -0.95
PDH1Q12428 SEC61YLR378C 1443 nt9.13□□□□□ -0.95
PDH1Q12428 TPS1YBR126C 1488 nt9.12□□□□□ -0.95
PDH1Q12428 DAK2YFL053W 1776 nt9.11□□□□□ -0.95
PDH1Q12428 YCP4YCR004C 744 nt9.1□□□□□ -0.95
PDH1Q12428 SAM2YDR502C 1155 nt9.1□□□□□ -0.95
PDH1Q12428 OXA1YER154W 1209 nt9.1□□□□□ -0.95
PDH1Q12428 OYE2YHR179W 1203 nt9.1□□□□□ -0.95
PDH1Q12428 NIF3YGL221C 867 nt9.09□□□□□ -0.95
PDH1Q12428 RAS2YNL098C 969 nt9.09□□□□□ -0.95
PDH1Q12428 SHY1YGR112W 1170 nt9.08□□□□□ -0.96
PDH1Q12428 YNL024CYNL024C 741 nt9.08□□□□□ -0.96
PDH1Q12428 UFO1YML088W 2007 nt9.08□□□□□ -0.96
PDH1Q12428 YDR510C-AYDR510C-A 117 nt9.07□□□□□ -0.96
PDH1Q12428 POP2YNR052C 1302 nt9.06□□□□□ -0.96
PDH1Q12428 QDR2YIL121W 1629 nt9.06□□□□□ -0.96
PDH1Q12428 CYT2YKL087C 675 nt9.06□□□□□ -0.96
PDH1Q12428 GID7YCL039W 2238 nt9.05□□□□□ -0.96
PDH1Q12428 SAM50YNL026W 1455 nt9.05□□□□□ -0.96
PDH1Q12428 YER188WYER188W 720 nt9.05□□□□□ -0.96
PDH1Q12428 IGD1YFR017C 588 nt9.05□□□□□ -0.96
PDH1Q12428 FUB1YCR076C 753 nt9.04□□□□□ -0.96
PDH1Q12428 EAF3YPR023C 1206 nt9.04□□□□□ -0.96
PDH1Q12428 YER152W-AYER152W-A 567 nt9.03□□□□□ -0.96
PDH1Q12428 URA6YKL024C 615 nt9.03□□□□□ -0.96
PDH1Q12428 OYE3YPL171C 1203 nt9.03□□□□□ -0.96
PDH1Q12428 TMA23YMR269W 636 nt8.99□□□□□ -0.97
PDH1Q12428 PET8YNL003C 855 nt8.99□□□□□ -0.97
PDH1Q12428 YCR025CYCR025C 411 nt8.98□□□□□ -0.97
PDH1Q12428 KRE1YNL322C 942 nt8.98□□□□□ -0.97
PDH1Q12428 MAS1YLR163C 1389 nt8.98□□□□□ -0.97
PDH1Q12428 tA(AGC)DtA(AGC)D 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)FtA(AGC)F 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)GtA(AGC)G 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)HtA(AGC)H 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)JtA(AGC)J 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)K1tA(AGC)K1 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)K2tA(AGC)K2 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)LtA(AGC)L 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)M1tA(AGC)M1 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)M2tA(AGC)M2 73 nt8.97□□□□□ -0.97
PDH1Q12428 tA(AGC)PtA(AGC)P 73 nt8.97□□□□□ -0.97
PDH1Q12428 IPL1YPL209C 1104 nt8.97□□□□□ -0.97
PDH1Q12428 ACO2YJL200C 2370 nt8.97□□□□□ -0.97
PDH1Q12428 MCM5YLR274W 2328 nt8.96□□□□□ -0.98
PDH1Q12428 ESBP6YNL125C 2022 nt8.95□□□□□ -0.98
PDH1Q12428 BUD20YLR074C 501 nt8.94□□□□□ -0.98
PDH1Q12428 DLD2YDL178W 1593 nt8.94□□□□□ -0.98
PDH1Q12428 DDI1YER143W 1287 nt8.93□□□□□ -0.98
PDH1Q12428 IMO32YGR031W 1029 nt8.93□□□□□ -0.98
PDH1Q12428 SPS100YHR139C 981 nt8.93□□□□□ -0.98
PDH1Q12428 OSH7YHR001W 1314 nt8.92□□□□□ -0.98
PDH1Q12428 SWM1YDR260C 513 nt8.91□□□□□ -0.98
PDH1Q12428 YAT1YAR035W 2064 nt8.9□□□□□ -0.98
Retrieved 100 of 7,029 protein–RNA pairs in 29.7 ms