Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC26.55■■□□□ 1.84
Cxcl12P40224 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC26.54■■□□□ 1.84
Cxcl12P40224 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC26.52■■□□□ 1.84
Cxcl12P40224 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
Cxcl12P40224 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Cxcl12P40224 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.5■■□□□ 1.83
Cxcl12P40224 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Cxcl12P40224 Mir6538-201ENSMUST00000183713 110 ntBASIC26.48■■□□□ 1.83
Cxcl12P40224 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cxcl12P40224 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.47■■□□□ 1.83
Cxcl12P40224 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cxcl12P40224 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Cxcl12P40224 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Cxcl12P40224 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.46■■□□□ 1.83
Cxcl12P40224 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
Cxcl12P40224 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
Cxcl12P40224 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cxcl12P40224 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Cxcl12P40224 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Cxcl12P40224 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC26.41■■□□□ 1.82
Cxcl12P40224 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Cxcl12P40224 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Cxcl12P40224 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
Cxcl12P40224 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Cxcl12P40224 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cxcl12P40224 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Cxcl12P40224 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Cxcl12P40224 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
Cxcl12P40224 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Cxcl12P40224 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cxcl12P40224 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Cxcl12P40224 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Cxcl12P40224 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Cxcl12P40224 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cxcl12P40224 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cxcl12P40224 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cxcl12P40224 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Cxcl12P40224 Gm11175-201ENSMUST00000116172 543 ntBASIC26.34■■□□□ 1.81
Cxcl12P40224 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.34■■□□□ 1.81
Cxcl12P40224 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cxcl12P40224 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Cxcl12P40224 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Cxcl12P40224 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Cxcl12P40224 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cxcl12P40224 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC26.3■■□□□ 1.8
Cxcl12P40224 Cap2-205ENSMUST00000225824 1634 ntBASIC26.29■■□□□ 1.8
Cxcl12P40224 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cxcl12P40224 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Cxcl12P40224 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Cxcl12P40224 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.28■■□□□ 1.8
Cxcl12P40224 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC26.28■■□□□ 1.8
Cxcl12P40224 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cxcl12P40224 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cxcl12P40224 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.27■■□□□ 1.8
Cxcl12P40224 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cxcl12P40224 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Cxcl12P40224 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Cxcl12P40224 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cxcl12P40224 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Cxcl12P40224 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cxcl12P40224 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cxcl12P40224 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cxcl12P40224 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.22■■□□□ 1.79
Cxcl12P40224 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.22■■□□□ 1.79
Cxcl12P40224 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Cxcl12P40224 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC26.2■■□□□ 1.78
Cxcl12P40224 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.2■■□□□ 1.78
Cxcl12P40224 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cxcl12P40224 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC26.19■■□□□ 1.78
Cxcl12P40224 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Cxcl12P40224 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Cxcl12P40224 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Cxcl12P40224 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC26.14■■□□□ 1.78
Cxcl12P40224 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Cxcl12P40224 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.13■■□□□ 1.77
Cxcl12P40224 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Cxcl12P40224 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Cxcl12P40224 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Cxcl12P40224 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.11■■□□□ 1.77
Cxcl12P40224 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Cxcl12P40224 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Cxcl12P40224 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.09■■□□□ 1.77
Cxcl12P40224 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
Cxcl12P40224 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Cxcl12P40224 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Cxcl12P40224 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cxcl12P40224 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Cxcl12P40224 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.07■■□□□ 1.76
Cxcl12P40224 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Cxcl12P40224 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
Cxcl12P40224 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Cxcl12P40224 Gm30346-201ENSMUST00000218641 1699 ntBASIC26.04■■□□□ 1.76
Cxcl12P40224 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Cxcl12P40224 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
Cxcl12P40224 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.02■■□□□ 1.76
Cxcl12P40224 Gm6311-201ENSMUST00000073790 878 ntBASIC26.02■■□□□ 1.76
Cxcl12P40224 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Cxcl12P40224 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Cxcl12P40224 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Cxcl12P40224 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms