Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 PEX2YJL210W 816 nt7.36□□□□□ -1.23
RPB11P38902 ACH1YBL015W 1581 nt7.36□□□□□ -1.23
RPB11P38902 CWP2YKL096W-A 279 nt7.35□□□□□ -1.23
RPB11P38902 GTB1YDR221W 2109 nt7.34□□□□□ -1.23
RPB11P38902 MTG2YHR168W 1557 nt7.34□□□□□ -1.23
RPB11P38902 TRT2tT(CGU)K 72 nt7.34□□□□□ -1.23
RPB11P38902 MET28YIR017C 564 nt7.34□□□□□ -1.23
RPB11P38902 SBA1YKL117W 651 nt7.34□□□□□ -1.23
RPB11P38902 LSR1LSR1 1175 nt7.34□□□□□ -1.23
RPB11P38902 BRR1YPR057W 1026 nt7.34□□□□□ -1.23
RPB11P38902 HXT10YFL011W 1641 nt7.34□□□□□ -1.24
RPB11P38902 THI72YOR192C 1800 nt7.34□□□□□ -1.24
RPB11P38902 YKL133CYKL133C 1392 nt7.33□□□□□ -1.24
RPB11P38902 FMS1YMR020W 1527 nt7.33□□□□□ -1.24
RPB11P38902 GAL2YLR081W 1725 nt7.33□□□□□ -1.24
RPB11P38902 NBA1YOL070C 1506 nt7.32□□□□□ -1.24
RPB11P38902 MRS6YOR370C 1812 nt7.31□□□□□ -1.24
RPB11P38902 PHO23YNL097C 993 nt7.31□□□□□ -1.24
RPB11P38902 GND2YGR256W 1479 nt7.3□□□□□ -1.24
RPB11P38902 PHO89YBR296C 1725 nt7.3□□□□□ -1.24
RPB11P38902 SAM2YDR502C 1155 nt7.3□□□□□ -1.24
RPB11P38902 MIR1YJR077C 936 nt7.3□□□□□ -1.24
RPB11P38902 YPL251WYPL251W 303 nt7.3□□□□□ -1.24
RPB11P38902 HEM14YER014W 1620 nt7.3□□□□□ -1.24
RPB11P38902 MEX67YPL169C 1800 nt7.29□□□□□ -1.24
RPB11P38902 AKR2YOR034C 2250 nt7.29□□□□□ -1.24
RPB11P38902 ALP1YNL270C 1722 nt7.29□□□□□ -1.24
RPB11P38902 YIL177CYIL177C 5277 nt7.29□□□□□ -1.24
RPB11P38902 UBA4YHR111W 1323 nt7.28□□□□□ -1.24
RPB11P38902 YPS3YLR121C 1527 nt7.28□□□□□ -1.24
RPB11P38902 COQ2YNR041C 1119 nt7.27□□□□□ -1.25
RPB11P38902 FIT3YOR383C 615 nt7.27□□□□□ -1.25
RPB11P38902 NRT1YOR071C 1797 nt7.26□□□□□ -1.25
RPB11P38902 TIM44YIL022W 1296 nt7.26□□□□□ -1.25
RPB11P38902 AGP3YFL055W 1677 nt7.25□□□□□ -1.25
RPB11P38902 YCR087WYCR087W 516 nt7.25□□□□□ -1.25
RPB11P38902 UTH1YKR042W 1098 nt7.25□□□□□ -1.25
RPB11P38902 RPD3YNL330C 1302 nt7.24□□□□□ -1.25
RPB11P38902 YHR219WYHR219W 1875 nt7.24□□□□□ -1.25
RPB11P38902 SEC61YLR378C 1443 nt7.23□□□□□ -1.25
RPB11P38902 FLR1YBR008C 1647 nt7.23□□□□□ -1.25
RPB11P38902 TOK1YJL093C 2076 nt7.23□□□□□ -1.25
RPB11P38902 OXA1YER154W 1209 nt7.22□□□□□ -1.25
RPB11P38902 CLB6YGR109C 1143 nt7.22□□□□□ -1.25
RPB11P38902 YSR3YKR053C 1215 nt7.22□□□□□ -1.25
RPB11P38902 YMR262WYMR262W 942 nt7.22□□□□□ -1.25
RPB11P38902 MDL2YPL270W 2322 nt7.21□□□□□ -1.26
RPB11P38902 RPL4BYDR012W 1089 nt7.21□□□□□ -1.26
RPB11P38902 RRT5YFR032C 870 nt7.21□□□□□ -1.26
RPB11P38902 RPL4AYBR031W 1089 nt7.21□□□□□ -1.26
RPB11P38902 DLD2YDL178W 1593 nt7.2□□□□□ -1.26
RPB11P38902 MIM1YOL026C 342 nt7.2□□□□□ -1.26
RPB11P38902 INH1YDL181W 258 nt7.19□□□□□ -1.26
RPB11P38902 YMR103CYMR103C 363 nt7.19□□□□□ -1.26
RPB11P38902 KRR1YCL059C 951 nt7.18□□□□□ -1.26
RPB11P38902 THI74YDR438W 1113 nt7.18□□□□□ -1.26
RPB11P38902 ENT4YLL038C 744 nt7.17□□□□□ -1.26
RPB11P38902 YLR046CYLR046C 813 nt7.17□□□□□ -1.26
RPB11P38902 DLD3YEL071W 1491 nt7.17□□□□□ -1.26
RPB11P38902 MTO1YGL236C 2010 nt7.17□□□□□ -1.26
RPB11P38902 YRF1-3YGR296W 5580 nt7.16□□□□□ -1.26
RPB11P38902 YRF1-6YNL339C 5580 nt7.16□□□□□ -1.26
RPB11P38902 YRF1-7YPL283C 5580 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)BtD(GUC)B 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)DtD(GUC)D 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)G1tD(GUC)G1 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)G2tD(GUC)G2 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)I1tD(GUC)I1 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)I2tD(GUC)I2 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)J1tD(GUC)J1 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)J2tD(GUC)J2 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)J3tD(GUC)J3 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)J4tD(GUC)J4 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)KtD(GUC)K 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)L1tD(GUC)L1 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)L2tD(GUC)L2 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)MtD(GUC)M 72 nt7.16□□□□□ -1.26
RPB11P38902 tD(GUC)OtD(GUC)O 72 nt7.16□□□□□ -1.26
RPB11P38902 RPS14BYJL191W 417 nt7.16□□□□□ -1.26
RPB11P38902 DAK2YFL053W 1776 nt7.14□□□□□ -1.27
RPB11P38902 RBG1YAL036C 1110 nt7.14□□□□□ -1.27
RPB11P38902 AIM45YPR004C 1035 nt7.14□□□□□ -1.27
RPB11P38902 HBS1YKR084C 1836 nt7.13□□□□□ -1.27
RPB11P38902 HEM13YDR044W 987 nt7.13□□□□□ -1.27
RPB11P38902 RIM2YBR192W 1134 nt7.13□□□□□ -1.27
RPB11P38902 MSF1YPR047W 1410 nt7.12□□□□□ -1.27
RPB11P38902 AIM1YAL046C 357 nt7.12□□□□□ -1.27
RPB11P38902 XYL2YLR070C 1071 nt7.12□□□□□ -1.27
RPB11P38902 RSC4YKR008W 1878 nt7.11□□□□□ -1.27
RPB11P38902 UFD1YGR048W 1086 nt7.11□□□□□ -1.27
RPB11P38902 RPC31YNL151C 756 nt7.11□□□□□ -1.27
RPB11P38902 VMA11YPL234C 495 nt7.11□□□□□ -1.27
RPB11P38902 YDR094WYDR094W 336 nt7.1□□□□□ -1.27
RPB11P38902 YER188WYER188W 720 nt7.1□□□□□ -1.27
RPB11P38902 OSH7YHR001W 1314 nt7.09□□□□□ -1.27
RPB11P38902 FIT1YDR534C 1587 nt7.09□□□□□ -1.27
RPB11P38902 LSB5YCL034W 1065 nt7.08□□□□□ -1.28
RPB11P38902 YGL034CYGL034C 366 nt7.07□□□□□ -1.28
RPB11P38902 PAU16YKL224C 372 nt7.07□□□□□ -1.28
RPB11P38902 APT2YDR441C 546 nt7.06□□□□□ -1.28
Retrieved 100 of 7,029 protein–RNA pairs in 7.9 ms