Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Zxda-201ENSMUST00000117281 2621 ntBASIC21.47■■□□□ 1.03
Dkk1O54908 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Dkk1O54908 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Dkk1O54908 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Dkk1O54908 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.46■■□□□ 1.03
Dkk1O54908 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Dkk1O54908 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Dkk1O54908 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Dkk1O54908 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Dkk1O54908 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
Dkk1O54908 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dkk1O54908 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Dkk1O54908 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Dkk1O54908 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dkk1O54908 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.4■■□□□ 1.02
Dkk1O54908 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dkk1O54908 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Dkk1O54908 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dkk1O54908 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Dkk1O54908 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Dkk1O54908 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Dkk1O54908 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.37■■□□□ 1.01
Dkk1O54908 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Dkk1O54908 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.36■■□□□ 1.01
Dkk1O54908 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Dkk1O54908 Gm24970-201ENSMUST00000175582 82 ntBASIC21.35■■□□□ 1.01
Dkk1O54908 Gm45855-201ENSMUST00000212546 880 ntBASIC21.34■■□□□ 1.01
Dkk1O54908 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.34■■□□□ 1.01
Dkk1O54908 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Dkk1O54908 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Dkk1O54908 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.32■■□□□ 1
Dkk1O54908 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dkk1O54908 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Dkk1O54908 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Dkk1O54908 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.31■■□□□ 1
Dkk1O54908 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dkk1O54908 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.31■■□□□ 1
Dkk1O54908 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Dkk1O54908 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.31■■□□□ 1
Dkk1O54908 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Dkk1O54908 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.3■■□□□ 1
Dkk1O54908 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dkk1O54908 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dkk1O54908 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.3■■□□□ 1
Dkk1O54908 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Dkk1O54908 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Dkk1O54908 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Dkk1O54908 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.28■■□□□ 1
Dkk1O54908 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.28■■□□□ 1
Dkk1O54908 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Dkk1O54908 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.27■■□□□ 1
Dkk1O54908 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.27■■□□□ 1
Dkk1O54908 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.26■□□□□ 0.99
Dkk1O54908 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Dkk1O54908 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.26■□□□□ 0.99
Dkk1O54908 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Dkk1O54908 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.25■□□□□ 0.99
Dkk1O54908 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Dkk1O54908 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Dkk1O54908 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC21.23■□□□□ 0.99
Dkk1O54908 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.23■□□□□ 0.99
Dkk1O54908 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Dkk1O54908 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.22■□□□□ 0.99
Dkk1O54908 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Dkk1O54908 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Dkk1O54908 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Dkk1O54908 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Dkk1O54908 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Dkk1O54908 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.2■□□□□ 0.98
Dkk1O54908 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.2■□□□□ 0.98
Dkk1O54908 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
Dkk1O54908 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.2■□□□□ 0.98
Dkk1O54908 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Dkk1O54908 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dkk1O54908 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Dkk1O54908 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.18■□□□□ 0.98
Dkk1O54908 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Dkk1O54908 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Dkk1O54908 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC21.17■□□□□ 0.98
Dkk1O54908 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Dkk1O54908 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.16■□□□□ 0.98
Dkk1O54908 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Dkk1O54908 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Dkk1O54908 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Dkk1O54908 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Dkk1O54908 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Dkk1O54908 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Dkk1O54908 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Dkk1O54908 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Dkk1O54908 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dkk1O54908 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dkk1O54908 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Dkk1O54908 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dkk1O54908 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Dkk1O54908 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dkk1O54908 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Dkk1O54908 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Dkk1O54908 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Dkk1O54908 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Dkk1O54908 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms