Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	COQ2	YNR041C	1119 nt		9.33	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	Q0144	Q0144	330 nt		9.32	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	TIF6	YPR016C	738 nt		9.32	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	NSG2	YNL156C	900 nt		9.31	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	HIP1	YGR191W	1812 nt		9.31	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	XYL2	YLR070C	1071 nt		9.3	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	YGL034C	YGL034C	366 nt		9.29	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	YJL118W	YJL118W	660 nt		9.29	□□□□□ -0.92
TY4B-P	A0A0B7P3V8	YJR154W	YJR154W	1041 nt		9.27	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	ZRT3	YKL175W	1512 nt		9.26	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	MET28	YIR017C	564 nt		9.26	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	RBG1	YAL036C	1110 nt		9.26	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	PSD1	YNL169C	1503 nt		9.26	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	AIM45	YPR004C	1035 nt		9.25	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	RPL4B	YDR012W	1089 nt		9.24	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	RPL4A	YBR031W	1089 nt		9.24	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	UTP6	YDR449C	1323 nt		9.24	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	DBP1	YPL119C	1854 nt		9.23	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	HXT1	YHR094C	1713 nt		9.23	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	UTH1	YKR042W	1098 nt		9.23	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	YAR028W	YAR028W	705 nt		9.23	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	YLR173W	YLR173W	1827 nt		9.22	□□□□□ -0.93
TY4B-P	A0A0B7P3V8	YNL067W-A	YNL067W-A	147 nt		9.21	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	SFL1	YOR140W	2301 nt		9.21	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	SBA1	YKL117W	651 nt		9.2	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	YOR072W	YOR072W	315 nt		9.19	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	HMT1	YBR034C	1047 nt		9.19	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	SED1	YDR077W	1017 nt		9.18	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	LIP1	YMR298W	453 nt		9.18	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	MDL2	YPL270W	2322 nt		9.18	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	CYT1	YOR065W	930 nt		9.17	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	FIT3	YOR383C	615 nt		9.17	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	MTG2	YHR168W	1557 nt		9.16	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	ALR1	YOL130W	2580 nt		9.16	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	RPS14B	YJL191W	417 nt		9.16	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	YER190C-A	YER190C-A	576 nt		9.15	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	YGR296C-A	YGR296C-A	576 nt		9.15	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	YML133W-A	YML133W-A	576 nt		9.15	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	YHM2	YMR241W	945 nt		9.15	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	YNL339W-A	YNL339W-A	576 nt		9.15	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	YPL283W-A	YPL283W-A	576 nt		9.15	□□□□□ -0.94
TY4B-P	A0A0B7P3V8	SHY1	YGR112W	1170 nt		9.14	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	YMR244W	YMR244W	1068 nt		9.14	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	GLR1	YPL091W	1452 nt		9.14	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	ALP1	YNL270C	1722 nt		9.14	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	YJL067W	YJL067W	351 nt		9.13	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	RTG2	YGL252C	1767 nt		9.13	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	AKR2	YOR034C	2250 nt		9.13	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	YBL086C	YBL086C	1401 nt		9.13	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	THI6	YPL214C	1623 nt		9.13	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	PCP1	YGR101W	1041 nt		9.12	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	YPL071C	YPL071C	471 nt		9.11	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	PET20	YPL159C	762 nt		9.11	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	SNU66	YOR308C	1764 nt		9.11	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	ZTA1	YBR046C	1005 nt		9.1	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	PAB1	YER165W	1734 nt		9.09	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	HIS2	YFR025C	1008 nt		9.09	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	SAM1	YLR180W	1149 nt		9.09	□□□□□ -0.95
TY4B-P	A0A0B7P3V8	LPD1	YFL018C	1500 nt		9.08	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	LEU9	YOR108W	1815 nt		9.06	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	TSC10	YBR265W	963 nt		9.06	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	URA6	YKL024C	615 nt		9.05	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	YMR226C	YMR226C	804 nt		9.05	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	TOA2	YKL058W	369 nt		9.04	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	SKG1	YKR100C	1068 nt		9.04	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	YPL251W	YPL251W	303 nt		9.04	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	BRR1	YPR057W	1026 nt		9.04	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	ADE2	YOR128C	1716 nt		9.03	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	YPL041C	YPL041C	624 nt		9.03	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	MEX67	YPL169C	1800 nt		9.03	□□□□□ -0.96
TY4B-P	A0A0B7P3V8	SDH5	YOL071W	489 nt		9.02	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	GCD11	YER025W	1584 nt		9.02	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	UFO1	YML088W	2007 nt		9.02	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	snR78	snR78	87 nt		9.01	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	HXT10	YFL011W	1641 nt		9.01	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	DUR3	YHL016C	2208 nt		9	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	UGP1	YKL035W	1500 nt		9	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	YCR099C	YCR099C	468 nt		8.99	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	COG1	YGL223C	1254 nt		8.99	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	YLR279W	YLR279W	390 nt		8.99	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	YGR012W	YGR012W	1182 nt		8.98	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	OYE3	YPL171C	1203 nt		8.98	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	GND2	YGR256W	1479 nt		8.97	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	UFD1	YGR048W	1086 nt		8.97	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	TRT2	tT(CGU)K	72 nt		8.97	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	YLR111W	YLR111W	333 nt		8.97	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	PET8	YNL003C	855 nt		8.97	□□□□□ -0.97
TY4B-P	A0A0B7P3V8	CWC15	YDR163W	528 nt		8.96	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	YMR103C	YMR103C	363 nt		8.96	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	YNL024C	YNL024C	741 nt		8.95	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	LSB5	YCL034W	1065 nt		8.95	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	FTH1	YBR207W	1398 nt		8.95	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	MSB4	YOL112W	1479 nt		8.95	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	RBG2	YGR173W	1107 nt		8.94	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	DMA2	YNL116W	1569 nt		8.94	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	YIL100C-A	YIL100C-A	339 nt		8.92	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	SAM2	YDR502C	1155 nt		8.91	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	RAD23	YEL037C	1197 nt		8.91	□□□□□ -0.98
TY4B-P	A0A0B7P3V8	ECM10	YEL030W	1935 nt		8.9	□□□□□ -0.99
TY4B-P	A0A0B7P3V8	VAR1	Q0140	1197 nt		8.89	□□□□□ -0.99

Retrieved 100 of 7,029 protein–RNA pairs in 7.7 ms