Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trav12n-2A0A075B626 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trav12n-2A0A075B626 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC22.47■■□□□ 1.19
Trav12n-2A0A075B626 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trav12n-2A0A075B626 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trav12n-2A0A075B626 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Trav12n-2A0A075B626 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Trav12n-2A0A075B626 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trav12n-2A0A075B626 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.45■■□□□ 1.18
Trav12n-2A0A075B626 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trav12n-2A0A075B626 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Trav12n-2A0A075B626 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Trav12n-2A0A075B626 Zxda-201ENSMUST00000117281 2621 ntBASIC22.43■■□□□ 1.18
Trav12n-2A0A075B626 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC22.42■■□□□ 1.18
Trav12n-2A0A075B626 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav12n-2A0A075B626 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Trav12n-2A0A075B626 Gm24970-201ENSMUST00000175582 82 ntBASIC22.41■■□□□ 1.18
Trav12n-2A0A075B626 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC22.41■■□□□ 1.18
Trav12n-2A0A075B626 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Trav12n-2A0A075B626 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.39■■□□□ 1.17
Trav12n-2A0A075B626 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trav12n-2A0A075B626 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Trav12n-2A0A075B626 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Trav12n-2A0A075B626 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Trav12n-2A0A075B626 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav12n-2A0A075B626 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav12n-2A0A075B626 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Trav12n-2A0A075B626 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Trav12n-2A0A075B626 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
Trav12n-2A0A075B626 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
Trav12n-2A0A075B626 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Trav12n-2A0A075B626 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Trav12n-2A0A075B626 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.32■■□□□ 1.16
Trav12n-2A0A075B626 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.32■■□□□ 1.16
Trav12n-2A0A075B626 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trav12n-2A0A075B626 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Trav12n-2A0A075B626 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Trav12n-2A0A075B626 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Trav12n-2A0A075B626 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC22.3■■□□□ 1.16
Trav12n-2A0A075B626 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav12n-2A0A075B626 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Trav12n-2A0A075B626 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
Trav12n-2A0A075B626 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.3■■□□□ 1.16
Trav12n-2A0A075B626 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Trav12n-2A0A075B626 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.29■■□□□ 1.16
Trav12n-2A0A075B626 AC157572.2-201ENSMUST00000226970 908 ntBASIC22.29■■□□□ 1.16
Trav12n-2A0A075B626 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Trav12n-2A0A075B626 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC22.28■■□□□ 1.16
Trav12n-2A0A075B626 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Trav12n-2A0A075B626 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.28■■□□□ 1.16
Trav12n-2A0A075B626 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Trav12n-2A0A075B626 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav12n-2A0A075B626 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Trav12n-2A0A075B626 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Trav12n-2A0A075B626 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Trav12n-2A0A075B626 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Trav12n-2A0A075B626 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trav12n-2A0A075B626 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Trav12n-2A0A075B626 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Trav12n-2A0A075B626 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.23■■□□□ 1.15
Trav12n-2A0A075B626 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.23■■□□□ 1.15
Trav12n-2A0A075B626 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.22■■□□□ 1.15
Trav12n-2A0A075B626 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trav12n-2A0A075B626 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Trav12n-2A0A075B626 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.21■■□□□ 1.15
Trav12n-2A0A075B626 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.21■■□□□ 1.15
Trav12n-2A0A075B626 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.21■■□□□ 1.15
Trav12n-2A0A075B626 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Trav12n-2A0A075B626 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC22.2■■□□□ 1.14
Trav12n-2A0A075B626 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Trav12n-2A0A075B626 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Trav12n-2A0A075B626 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Trav12n-2A0A075B626 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav12n-2A0A075B626 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav12n-2A0A075B626 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Trav12n-2A0A075B626 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Trav12n-2A0A075B626 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Trav12n-2A0A075B626 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC22.16■■□□□ 1.14
Trav12n-2A0A075B626 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trav12n-2A0A075B626 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Trav12n-2A0A075B626 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Trav12n-2A0A075B626 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Trav12n-2A0A075B626 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC22.14■■□□□ 1.13
Trav12n-2A0A075B626 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Trav12n-2A0A075B626 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav12n-2A0A075B626 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trav12n-2A0A075B626 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Trav12n-2A0A075B626 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Trav12n-2A0A075B626 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Trav12n-2A0A075B626 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.12■■□□□ 1.13
Trav12n-2A0A075B626 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.11■■□□□ 1.13
Trav12n-2A0A075B626 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.11■■□□□ 1.13
Trav12n-2A0A075B626 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav12n-2A0A075B626 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trav12n-2A0A075B626 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trav12n-2A0A075B626 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Trav12n-2A0A075B626 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav12n-2A0A075B626 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trav12n-2A0A075B626 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Trav12n-2A0A075B626 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 9.4 ms