Protein–RNA interactions for Protein: A0A075B5X4

Ighv8-11, Immunoglobulin heavy variable V8-11 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-11A0A075B5X4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv8-11A0A075B5X4 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv8-11A0A075B5X4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv8-11A0A075B5X4 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv8-11A0A075B5X4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.26■□□□□ 0.35
Ighv8-11A0A075B5X4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv8-11A0A075B5X4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv8-11A0A075B5X4 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ighv8-11A0A075B5X4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ighv8-11A0A075B5X4 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv8-11A0A075B5X4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv8-11A0A075B5X4 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv8-11A0A075B5X4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv8-11A0A075B5X4 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv8-11A0A075B5X4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.22■□□□□ 0.35
Ighv8-11A0A075B5X4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv8-11A0A075B5X4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.21■□□□□ 0.35
Ighv8-11A0A075B5X4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ighv8-11A0A075B5X4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv8-11A0A075B5X4 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-11A0A075B5X4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-11A0A075B5X4 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-11A0A075B5X4 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-11A0A075B5X4 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-11A0A075B5X4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv8-11A0A075B5X4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv8-11A0A075B5X4 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv8-11A0A075B5X4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.18■□□□□ 0.34
Ighv8-11A0A075B5X4 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ighv8-11A0A075B5X4 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv8-11A0A075B5X4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv8-11A0A075B5X4 Gm24970-201ENSMUST00000175582 82 ntBASIC17.17■□□□□ 0.34
Ighv8-11A0A075B5X4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv8-11A0A075B5X4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv8-11A0A075B5X4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv8-11A0A075B5X4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.17■□□□□ 0.34
Ighv8-11A0A075B5X4 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.16■□□□□ 0.34
Ighv8-11A0A075B5X4 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv8-11A0A075B5X4 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv8-11A0A075B5X4 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-11A0A075B5X4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-11A0A075B5X4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-11A0A075B5X4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Ighv8-11A0A075B5X4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.15■□□□□ 0.34
Ighv8-11A0A075B5X4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv8-11A0A075B5X4 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv8-11A0A075B5X4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv8-11A0A075B5X4 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ighv8-11A0A075B5X4 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-11A0A075B5X4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ighv8-11A0A075B5X4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-11A0A075B5X4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-11A0A075B5X4 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ighv8-11A0A075B5X4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv8-11A0A075B5X4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC17.11■□□□□ 0.33
Ighv8-11A0A075B5X4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ighv8-11A0A075B5X4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv8-11A0A075B5X4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv8-11A0A075B5X4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv8-11A0A075B5X4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ighv8-11A0A075B5X4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC17.09■□□□□ 0.33
Ighv8-11A0A075B5X4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Ighv8-11A0A075B5X4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Ighv8-11A0A075B5X4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ighv8-11A0A075B5X4 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Ighv8-11A0A075B5X4 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.08■□□□□ 0.32
Ighv8-11A0A075B5X4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Ighv8-11A0A075B5X4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv8-11A0A075B5X4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv8-11A0A075B5X4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC17.07■□□□□ 0.32
Ighv8-11A0A075B5X4 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv8-11A0A075B5X4 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Ighv8-11A0A075B5X4 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.07■□□□□ 0.32
Ighv8-11A0A075B5X4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Ighv8-11A0A075B5X4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Ighv8-11A0A075B5X4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC17.06■□□□□ 0.32
Ighv8-11A0A075B5X4 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv8-11A0A075B5X4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Ighv8-11A0A075B5X4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ighv8-11A0A075B5X4 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv8-11A0A075B5X4 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv8-11A0A075B5X4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv8-11A0A075B5X4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.04■□□□□ 0.32
Ighv8-11A0A075B5X4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv8-11A0A075B5X4 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv8-11A0A075B5X4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv8-11A0A075B5X4 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv8-11A0A075B5X4 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Ighv8-11A0A075B5X4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.01■□□□□ 0.31
Ighv8-11A0A075B5X4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17■□□□□ 0.31
Ighv8-11A0A075B5X4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv8-11A0A075B5X4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17■□□□□ 0.31
Ighv8-11A0A075B5X4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC17■□□□□ 0.31
Ighv8-11A0A075B5X4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv8-11A0A075B5X4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Ighv8-11A0A075B5X4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv8-11A0A075B5X4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv8-11A0A075B5X4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv8-11A0A075B5X4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv8-11A0A075B5X4 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms