Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 AC142381.4-202ENST00000563973 229 ntBASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TMEFF1Q8IYR6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 AC128676.1-201ENST00000454392 318 ntBASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TMEFF1Q8IYR6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
TMEFF1Q8IYR6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TMEFF1Q8IYR6 AC137767.1-201ENST00000602918 1920 ntBASIC21.02■□□□□ 0.95
TMEFF1Q8IYR6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.02■□□□□ 0.95
TMEFF1Q8IYR6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 KRT16P2-201ENST00000414673 1423 ntBASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TMEFF1Q8IYR6 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 AL162412.1-201ENST00000567129 965 ntBASIC21■□□□□ 0.95
TMEFF1Q8IYR6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TMEFF1Q8IYR6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.99■□□□□ 0.95
TMEFF1Q8IYR6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 AC061975.6-201ENST00000579045 1553 ntBASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.98■□□□□ 0.95
TMEFF1Q8IYR6 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.97■□□□□ 0.95
TMEFF1Q8IYR6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms