Protein–RNA interactions for Protein: Q06159

ATG39, Autophagy-related protein 39, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG39Q06159 YLR042CYLR042C 486 nt2.35□□□□□ -2.03
ATG39Q06159 CSM3YMR048W 954 nt2.35□□□□□ -2.03
ATG39Q06159 YBL039W-BYBL039W-B 180 nt2.35□□□□□ -2.03
ATG39Q06159 YNL109WYNL109W 546 nt2.35□□□□□ -2.03
ATG39Q06159 FIG1YBR040W 897 nt2.35□□□□□ -2.03
ATG39Q06159 ACM1YPL267W 630 nt2.35□□□□□ -2.03
ATG39Q06159 APD1YBR151W 951 nt2.35□□□□□ -2.03
ATG39Q06159 PFF1YBR074W 2931 nt2.35□□□□□ -2.03
ATG39Q06159 YLR001CYLR001C 2589 nt2.35□□□□□ -2.03
ATG39Q06159 VPS9YML097C 1356 nt2.35□□□□□ -2.03
ATG39Q06159 MTL1YGR023W 1656 nt2.34□□□□□ -2.03
ATG39Q06159 CIK1YMR198W 1785 nt2.34□□□□□ -2.03
ATG39Q06159 RRG1YDR065W 1098 nt2.34□□□□□ -2.03
ATG39Q06159 YDR193WYDR193W 399 nt2.34□□□□□ -2.03
ATG39Q06159 YEL075CYEL075C 369 nt2.34□□□□□ -2.03
ATG39Q06159 MPC3YGR243W 441 nt2.34□□□□□ -2.03
ATG39Q06159 SGM1YJR134C 2124 nt2.34□□□□□ -2.03
ATG39Q06159 SDH3YKL141W 597 nt2.34□□□□□ -2.03
ATG39Q06159 PIR1YKL164C 1026 nt2.34□□□□□ -2.03
ATG39Q06159 OMA1YKR087C 1038 nt2.34□□□□□ -2.03
ATG39Q06159 MRPL33YMR286W 261 nt2.34□□□□□ -2.03
ATG39Q06159 SSP2YOR242C 1116 nt2.34□□□□□ -2.03
ATG39Q06159 POL30YBR088C 777 nt2.34□□□□□ -2.03
ATG39Q06159 TPO5YKL174C 1857 nt2.34□□□□□ -2.03
ATG39Q06159 RGC1YPR115W 3252 nt2.34□□□□□ -2.04
ATG39Q06159 MET5YJR137C 4329 nt2.33□□□□□ -2.04
ATG39Q06159 KAR5YMR065W 1515 nt2.33□□□□□ -2.04
ATG39Q06159 ECM11YDR446W 909 nt2.33□□□□□ -2.04
ATG39Q06159 YGR017WYGR017W 894 nt2.33□□□□□ -2.04
ATG39Q06159 EFG1YGR271C-A 702 nt2.33□□□□□ -2.04
ATG39Q06159 TEM1YML064C 738 nt2.33□□□□□ -2.04
ATG39Q06159 ARO4YBR249C 1113 nt2.33□□□□□ -2.04
ATG39Q06159 RRP7YCL031C 894 nt2.33□□□□□ -2.04
ATG39Q06159 YDR034C-DYDR034C-D 5313 nt2.33□□□□□ -2.04
ATG39Q06159 YDR210W-BYDR210W-B 5313 nt2.33□□□□□ -2.04
ATG39Q06159 YLR410W-BYLR410W-B 5313 nt2.33□□□□□ -2.04
ATG39Q06159 YCG1YDR325W 3108 nt2.33□□□□□ -2.04
ATG39Q06159 TOR1YJR066W 7413 nt2.33□□□□□ -2.04
ATG39Q06159 IKI3YLR384C 4050 nt2.33□□□□□ -2.04
ATG39Q06159 PSY2YNL201C 2577 nt2.33□□□□□ -2.04
ATG39Q06159 SLI1YGR212W 1407 nt2.33□□□□□ -2.04
ATG39Q06159 YDL050CYDL050C 372 nt2.32□□□□□ -2.04
ATG39Q06159 RNH202YDR279W 1053 nt2.32□□□□□ -2.04
ATG39Q06159 YGL138CYGL138C 1038 nt2.32□□□□□ -2.04
ATG39Q06159 BRR6YGL247W 594 nt2.32□□□□□ -2.04
ATG39Q06159 YGR160WYGR160W 612 nt2.32□□□□□ -2.04
ATG39Q06159 DUG3YNL191W 1074 nt2.32□□□□□ -2.04
ATG39Q06159 MPD2YOL088C 834 nt2.32□□□□□ -2.04
ATG39Q06159 PRM4YPL156C 855 nt2.32□□□□□ -2.04
ATG39Q06159 SUT2YPR009W 807 nt2.32□□□□□ -2.04
ATG39Q06159 ISW1YBR245C 3390 nt2.32□□□□□ -2.04
ATG39Q06159 MNT3YIL014W 1893 nt2.32□□□□□ -2.04
ATG39Q06159 GYL1YMR192W 2163 nt2.32□□□□□ -2.04
ATG39Q06159 DIA2YOR080W 2199 nt2.32□□□□□ -2.04
ATG39Q06159 HFM1YGL251C 3564 nt2.31□□□□□ -2.04
ATG39Q06159 NMD2YHR077C 3270 nt2.31□□□□□ -2.04
ATG39Q06159 WHI3YNL197C 1986 nt2.31□□□□□ -2.04
ATG39Q06159 RIM1YCR028C-A 408 nt2.31□□□□□ -2.04
ATG39Q06159 tF(GAA)DtF(GAA)D 73 nt2.31□□□□□ -2.04
ATG39Q06159 tF(GAA)NtF(GAA)N 73 nt2.31□□□□□ -2.04
ATG39Q06159 YGR107WYGR107W 450 nt2.31□□□□□ -2.04
ATG39Q06159 YHL005CYHL005C 393 nt2.31□□□□□ -2.04
ATG39Q06159 PSY3YLR376C 729 nt2.31□□□□□ -2.04
ATG39Q06159 DSF2YBR007C 2211 nt2.31□□□□□ -2.04
ATG39Q06159 RED1YLR263W 2484 nt2.31□□□□□ -2.04
ATG39Q06159 RIT1YMR283C 1542 nt2.31□□□□□ -2.04
ATG39Q06159 YKL222CYKL222C 2118 nt2.3□□□□□ -2.04
ATG39Q06159 DSE4YNR067C 3354 nt2.3□□□□□ -2.04
ATG39Q06159 SMX2YFL017W-A 234 nt2.3□□□□□ -2.04
ATG39Q06159 PEX14YGL153W 1026 nt2.3□□□□□ -2.04
ATG39Q06159 PRP18YGR006W 756 nt2.3□□□□□ -2.04
ATG39Q06159 THP2YHR167W 786 nt2.3□□□□□ -2.04
ATG39Q06159 SAW1YAL027W 786 nt2.3□□□□□ -2.04
ATG39Q06159 YJR071WYJR071W 369 nt2.3□□□□□ -2.04
ATG39Q06159 ARC19YKL013C 516 nt2.3□□□□□ -2.04
ATG39Q06159 APC9YLR102C 798 nt2.3□□□□□ -2.04
ATG39Q06159 YNL171CYNL171C 369 nt2.3□□□□□ -2.04
ATG39Q06159 YOL166CYOL166C 339 nt2.3□□□□□ -2.04
ATG39Q06159 VHR2YER064C 1518 nt2.3□□□□□ -2.04
ATG39Q06159 HEH2YDR458C 1992 nt2.3□□□□□ -2.04
ATG39Q06159 SST2YLR452C 2097 nt2.3□□□□□ -2.04
ATG39Q06159 YGR067CYGR067C 2415 nt2.3□□□□□ -2.04
ATG39Q06159 SIR3YLR442C 2937 nt2.29□□□□□ -2.04
ATG39Q06159 EPL1YFL024C 2499 nt2.29□□□□□ -2.04
ATG39Q06159 FAA2YER015W 2235 nt2.29□□□□□ -2.04
ATG39Q06159 RRI1YDL216C 1323 nt2.29□□□□□ -2.04
ATG39Q06159 YCR024C-BYCR024C-B 267 nt2.29□□□□□ -2.04
ATG39Q06159 PPH3YDR075W 927 nt2.29□□□□□ -2.04
ATG39Q06159 tC(GCA)BtC(GCA)B 72 nt2.29□□□□□ -2.04
ATG39Q06159 tC(GCA)GtC(GCA)G 72 nt2.29□□□□□ -2.04
ATG39Q06159 tC(GCA)P1tC(GCA)P1 72 nt2.29□□□□□ -2.04
ATG39Q06159 tC(GCA)P2tC(GCA)P2 72 nt2.29□□□□□ -2.04
ATG39Q06159 YER066C-AYER066C-A 501 nt2.29□□□□□ -2.04
ATG39Q06159 YFR010W-AYFR010W-A 189 nt2.29□□□□□ -2.04
ATG39Q06159 RPB9YGL070C 369 nt2.29□□□□□ -2.04
ATG39Q06159 YGR293CYGR293C 462 nt2.29□□□□□ -2.04
ATG39Q06159 HOT13YKL084W 351 nt2.29□□□□□ -2.04
ATG39Q06159 YLR076CYLR076C 423 nt2.29□□□□□ -2.04
ATG39Q06159 YLR297WYLR297W 390 nt2.29□□□□□ -2.04
ATG39Q06159 YMR194C-AYMR194C-A 225 nt2.29□□□□□ -2.04
Retrieved 100 of 7,029 protein–RNA pairs in 44.5 ms