Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 UBP12YJL197W 3765 nt4.81□□□□□ -1.64
VPS35P34110 ROK1YGL171W 1695 nt4.8□□□□□ -1.64
VPS35P34110 YML096WYML096W 1578 nt4.8□□□□□ -1.64
VPS35P34110 RRP42YDL111C 798 nt4.8□□□□□ -1.64
VPS35P34110 RSM24YDR175C 960 nt4.8□□□□□ -1.64
VPS35P34110 YOR248WYOR248W 303 nt4.8□□□□□ -1.64
VPS35P34110 TPK2YPL203W 1143 nt4.8□□□□□ -1.64
VPS35P34110 DER1YBR201W 636 nt4.8□□□□□ -1.64
VPS35P34110 NAM2YLR382C 2685 nt4.8□□□□□ -1.64
VPS35P34110 SEC2YNL272C 2280 nt4.8□□□□□ -1.64
VPS35P34110 MNR2YKL064W 2910 nt4.79□□□□□ -1.64
VPS35P34110 15S_rRNA15S_rRNA 1649 nt4.79□□□□□ -1.64
VPS35P34110 TAF12YDR145W 1620 nt4.79□□□□□ -1.64
VPS35P34110 ULP1YPL020C 1866 nt4.79□□□□□ -1.64
VPS35P34110 YDL199CYDL199C 2064 nt4.79□□□□□ -1.64
VPS35P34110 RSC58YLR033W 1509 nt4.79□□□□□ -1.64
VPS35P34110 SPO73YER046W 432 nt4.79□□□□□ -1.64
VPS35P34110 YER079WYER079W 633 nt4.79□□□□□ -1.64
VPS35P34110 YHI9YHR029C 885 nt4.79□□□□□ -1.64
VPS35P34110 TPM2YIL138C 486 nt4.79□□□□□ -1.64
VPS35P34110 YIR020CYIR020C 303 nt4.79□□□□□ -1.64
VPS35P34110 ACF4YJR083C 930 nt4.79□□□□□ -1.64
VPS35P34110 YAL047W-AYAL047W-A 330 nt4.79□□□□□ -1.64
VPS35P34110 YML084WYML084W 309 nt4.79□□□□□ -1.64
VPS35P34110 IST1YNL265C 897 nt4.79□□□□□ -1.64
VPS35P34110 GRE2YOL151W 1029 nt4.79□□□□□ -1.64
VPS35P34110 SVS1YPL163C 783 nt4.79□□□□□ -1.64
VPS35P34110 RPN3YER021W 1572 nt4.78□□□□□ -1.64
VPS35P34110 FAR8YMR029C 1572 nt4.78□□□□□ -1.64
VPS35P34110 PSY4YBL046W 1326 nt4.78□□□□□ -1.64
VPS35P34110 MNT4YNR059W 1743 nt4.78□□□□□ -1.64
VPS35P34110 snR68snR68 136 nt4.78□□□□□ -1.64
VPS35P34110 YHR138CYHR138C 345 nt4.78□□□□□ -1.64
VPS35P34110 RPL15BYMR121C 615 nt4.78□□□□□ -1.64
VPS35P34110 YNL181WYNL181W 1224 nt4.78□□□□□ -1.64
VPS35P34110 RNT1YMR239C 1416 nt4.78□□□□□ -1.64
VPS35P34110 PUB1YNL016W 1362 nt4.78□□□□□ -1.64
VPS35P34110 YER046W-AYER046W-A 330 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)CtK(CUU)C 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)D1tK(CUU)D1 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)D2tK(CUU)D2 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)E1tK(CUU)E1 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)E2tK(CUU)E2 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)FtK(CUU)F 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)G1tK(CUU)G1 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)G2tK(CUU)G2 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)G3tK(CUU)G3 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)ItK(CUU)I 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)JtK(CUU)J 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)KtK(CUU)K 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)MtK(CUU)M 73 nt4.77□□□□□ -1.65
VPS35P34110 tK(CUU)PtK(CUU)P 73 nt4.77□□□□□ -1.65
VPS35P34110 MRM2YGL136C 963 nt4.77□□□□□ -1.65
VPS35P34110 DPH1YIL103W 1278 nt4.77□□□□□ -1.65
VPS35P34110 IDP2YLR174W 1239 nt4.77□□□□□ -1.65
VPS35P34110 CTK3YML112W 891 nt4.77□□□□□ -1.65
VPS35P34110 CIT1YNR001C 1440 nt4.77□□□□□ -1.65
VPS35P34110 YNL284C-AYNL284C-A 1323 nt4.76□□□□□ -1.65
VPS35P34110 HNT1YDL125C 477 nt4.76□□□□□ -1.65
VPS35P34110 YGL039WYGL039W 1047 nt4.76□□□□□ -1.65
VPS35P34110 VMA10YHR039C-A 345 nt4.76□□□□□ -1.65
VPS35P34110 YNL146WYNL146W 303 nt4.76□□□□□ -1.65
VPS35P34110 YOL159CYOL159C 516 nt4.76□□□□□ -1.65
VPS35P34110 YPR050CYPR050C 414 nt4.76□□□□□ -1.65
VPS35P34110 LYP1YNL268W 1836 nt4.76□□□□□ -1.65
VPS35P34110 YER158CYER158C 1722 nt4.75□□□□□ -1.65
VPS35P34110 YGR117CYGR117C 1431 nt4.75□□□□□ -1.65
VPS35P34110 YER087C-AYER087C-A 552 nt4.75□□□□□ -1.65
VPS35P34110 BNA6YFR047C 888 nt4.75□□□□□ -1.65
VPS35P34110 MTM1YGR257C 1101 nt4.75□□□□□ -1.65
VPS35P34110 YAP3YHL009C 993 nt4.75□□□□□ -1.65
VPS35P34110 EMC2YJR088C 879 nt4.75□□□□□ -1.65
VPS35P34110 CNB1YKL190W 528 nt4.75□□□□□ -1.65
VPS35P34110 AFB1YLR040C 675 nt4.75□□□□□ -1.65
VPS35P34110 YKE2YLR200W 345 nt4.75□□□□□ -1.65
VPS35P34110 NNT1YLR285W 786 nt4.75□□□□□ -1.65
VPS35P34110 FBP1YLR377C 1047 nt4.75□□□□□ -1.65
VPS35P34110 YBL010CYBL010C 843 nt4.75□□□□□ -1.65
VPS35P34110 YOL159C-AYOL159C-A 273 nt4.75□□□□□ -1.65
VPS35P34110 YPL034WYPL034W 498 nt4.75□□□□□ -1.65
VPS35P34110 AFT2YPL202C 1251 nt4.75□□□□□ -1.65
VPS35P34110 RPL19AYBR084C-A 570 nt4.75□□□□□ -1.65
VPS35P34110 OPT2YPR194C 2634 nt4.75□□□□□ -1.65
VPS35P34110 MET12YPL023C 1974 nt4.74□□□□□ -1.65
VPS35P34110 FOX2YKR009C 2703 nt4.74□□□□□ -1.65
VPS35P34110 UBP6YFR010W 1500 nt4.74□□□□□ -1.65
VPS35P34110 YGL108CYGL108C 423 nt4.74□□□□□ -1.65
VPS35P34110 YIL175WYIL175W 318 nt4.74□□□□□ -1.65
VPS35P34110 YJL127C-BYJL127C-B 159 nt4.74□□□□□ -1.65
VPS35P34110 YKL044WYKL044W 321 nt4.74□□□□□ -1.65
VPS35P34110 MCR1YKL150W 909 nt4.74□□□□□ -1.65
VPS35P34110 ADY4YLR227C 1482 nt4.74□□□□□ -1.65
VPS35P34110 MUD2YKL074C 1584 nt4.74□□□□□ -1.65
VPS35P34110 TGL4YKR089C 2733 nt4.74□□□□□ -1.65
VPS35P34110 MNN4YKL201C 3537 nt4.73□□□□□ -1.65
VPS35P34110 RPN6YDL097C 1305 nt4.73□□□□□ -1.65
VPS35P34110 YMR221CYMR221C 1515 nt4.73□□□□□ -1.65
VPS35P34110 NDC80YIL144W 2076 nt4.73□□□□□ -1.65
VPS35P34110 YOL153CYOL153C 1746 nt4.73□□□□□ -1.65
VPS35P34110 MNN1YER001W 2289 nt4.73□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 117.9 ms