Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YLR363W-AYLR363W-A 258 nt2.86□□□□□ -1.95
RAD3P06839 YNR068CYNR068C 819 nt2.86□□□□□ -1.95
RAD3P06839 GYP7YDL234C 2241 nt2.86□□□□□ -1.95
RAD3P06839 YKR078WYKR078W 1758 nt2.86□□□□□ -1.95
RAD3P06839 ECM18YDR125C 1362 nt2.86□□□□□ -1.95
RAD3P06839 CIK1YMR198W 1785 nt2.85□□□□□ -1.95
RAD3P06839 YCR015CYCR015C 954 nt2.85□□□□□ -1.95
RAD3P06839 RRP42YDL111C 798 nt2.85□□□□□ -1.95
RAD3P06839 YDR491CYDR491C 492 nt2.85□□□□□ -1.95
RAD3P06839 YGL118CYGL118C 438 nt2.85□□□□□ -1.95
RAD3P06839 YGR190CYGR190C 366 nt2.85□□□□□ -1.95
RAD3P06839 SWD2YKL018W 990 nt2.85□□□□□ -1.95
RAD3P06839 YLL037WYLL037W 381 nt2.85□□□□□ -1.95
RAD3P06839 BLS1YLR408C 369 nt2.85□□□□□ -1.95
RAD3P06839 NMA111YNL123W 2994 nt2.85□□□□□ -1.95
RAD3P06839 YNR062CYNR062C 984 nt2.85□□□□□ -1.95
RAD3P06839 YOR062CYOR062C 807 nt2.85□□□□□ -1.95
RAD3P06839 YOR387CYOR387C 621 nt2.85□□□□□ -1.95
RAD3P06839 MRPL27YBR282W 441 nt2.85□□□□□ -1.95
RAD3P06839 EXO84YBR102C 2262 nt2.85□□□□□ -1.95
RAD3P06839 MTL1YGR023W 1656 nt2.85□□□□□ -1.95
RAD3P06839 YCR045W-AYCR045W-A 351 nt2.84□□□□□ -1.95
RAD3P06839 YDR290WYDR290W 330 nt2.84□□□□□ -1.95
RAD3P06839 YGR039WYGR039W 312 nt2.84□□□□□ -1.95
RAD3P06839 PTI1YGR156W 1278 nt2.84□□□□□ -1.95
RAD3P06839 YHL045WYHL045W 348 nt2.84□□□□□ -1.95
RAD3P06839 YHR097CYHR097C 1101 nt2.84□□□□□ -1.95
RAD3P06839 YBL028CYBL028C 321 nt2.84□□□□□ -1.95
RAD3P06839 YNL035CYNL035C 1170 nt2.84□□□□□ -1.95
RAD3P06839 SYC1YOR179C 567 nt2.84□□□□□ -1.95
RAD3P06839 RPS10AYOR293W 318 nt2.84□□□□□ -1.95
RAD3P06839 YPR050CYPR050C 414 nt2.84□□□□□ -1.95
RAD3P06839 GRX1YCL035C 333 nt2.84□□□□□ -1.95
RAD3P06839 YCG1YDR325W 3108 nt2.84□□□□□ -1.96
RAD3P06839 HFM1YGL251C 3564 nt2.84□□□□□ -1.96
RAD3P06839 BCK1YJL095W 4437 nt2.84□□□□□ -1.96
RAD3P06839 CET1YPL228W 1650 nt2.83□□□□□ -1.96
RAD3P06839 PDC2YDR081C 2778 nt2.83□□□□□ -1.96
RAD3P06839 ADH4YGL256W 1149 nt2.83□□□□□ -1.96
RAD3P06839 PEF1YGR058W 1008 nt2.83□□□□□ -1.96
RAD3P06839 EFG1YGR271C-A 702 nt2.83□□□□□ -1.96
RAD3P06839 YIL024CYIL024C 570 nt2.83□□□□□ -1.96
RAD3P06839 TFA2YKR062W 987 nt2.83□□□□□ -1.96
RAD3P06839 YLR311CYLR311C 348 nt2.83□□□□□ -1.96
RAD3P06839 TEX1YNL253W 1269 nt2.83□□□□□ -1.96
RAD3P06839 YPL276WYPL276W 438 nt2.83□□□□□ -1.96
RAD3P06839 YPR074W-AYPR074W-A 171 nt2.83□□□□□ -1.96
RAD3P06839 YDR239CYDR239C 2364 nt2.83□□□□□ -1.96
RAD3P06839 MNT3YIL014W 1893 nt2.83□□□□□ -1.96
RAD3P06839 NUF2YOL069W 1356 nt2.83□□□□□ -1.96
RAD3P06839 GYL1YMR192W 2163 nt2.83□□□□□ -1.96
RAD3P06839 DIA2YOR080W 2199 nt2.83□□□□□ -1.96
RAD3P06839 TPO5YKL174C 1857 nt2.82□□□□□ -1.96
RAD3P06839 SLH1YGR271W 5904 nt2.82□□□□□ -1.96
RAD3P06839 DDI2YFL061W 678 nt2.82□□□□□ -1.96
RAD3P06839 YIP5YGL161C 933 nt2.82□□□□□ -1.96
RAD3P06839 DCG1YIR030C 735 nt2.82□□□□□ -1.96
RAD3P06839 GLG2YJL137C 1143 nt2.82□□□□□ -1.96
RAD3P06839 YNL162W-AYNL162W-A 219 nt2.82□□□□□ -1.96
RAD3P06839 AXL1YPR122W 3627 nt2.82□□□□□ -1.96
RAD3P06839 YJR061WYJR061W 2808 nt2.82□□□□□ -1.96
RAD3P06839 MET5YJR137C 4329 nt2.81□□□□□ -1.96
RAD3P06839 BUB1YGR188C 3066 nt2.81□□□□□ -1.96
RAD3P06839 RPL35BYDL136W 363 nt2.81□□□□□ -1.96
RAD3P06839 YEL075CYEL075C 369 nt2.81□□□□□ -1.96
RAD3P06839 ERP6YGL002W 651 nt2.81□□□□□ -1.96
RAD3P06839 YGR064WYGR064W 369 nt2.81□□□□□ -1.96
RAD3P06839 RPL24BYGR148C 468 nt2.81□□□□□ -1.96
RAD3P06839 SAM37YMR060C 984 nt2.81□□□□□ -1.96
RAD3P06839 TRM112YNR046W 408 nt2.81□□□□□ -1.96
RAD3P06839 YOR020W-AYOR020W-A 273 nt2.81□□□□□ -1.96
RAD3P06839 RPL33AYPL143W 324 nt2.81□□□□□ -1.96
RAD3P06839 VPS64YDR200C 1815 nt2.81□□□□□ -1.96
RAD3P06839 PKP2YGL059W 1476 nt2.8□□□□□ -1.96
RAD3P06839 APC11YDL008W 498 nt2.8□□□□□ -1.96
RAD3P06839 TSC13YDL015C 933 nt2.8□□□□□ -1.96
RAD3P06839 YIL054WYIL054W 318 nt2.8□□□□□ -1.96
RAD3P06839 MPP6YNR024W 561 nt2.8□□□□□ -1.96
RAD3P06839 YBL108WYBL108W 306 nt2.8□□□□□ -1.96
RAD3P06839 YCL001W-AYCL001W-A 462 nt2.8□□□□□ -1.96
RAD3P06839 RED1YLR263W 2484 nt2.8□□□□□ -1.96
RAD3P06839 RIX1YHR197W 2292 nt2.8□□□□□ -1.96
RAD3P06839 YGR073CYGR073C 372 nt2.79□□□□□ -1.96
RAD3P06839 tW(CCA)G1tW(CCA)G1 72 nt2.79□□□□□ -1.96
RAD3P06839 tW(CCA)G2tW(CCA)G2 72 nt2.79□□□□□ -1.96
RAD3P06839 tW(CCA)JtW(CCA)J 72 nt2.79□□□□□ -1.96
RAD3P06839 tW(CCA)KtW(CCA)K 72 nt2.79□□□□□ -1.96
RAD3P06839 tW(CCA)MtW(CCA)M 72 nt2.79□□□□□ -1.96
RAD3P06839 tW(CCA)PtW(CCA)P 72 nt2.79□□□□□ -1.96
RAD3P06839 DID4YKL002W 699 nt2.79□□□□□ -1.96
RAD3P06839 YKR033CYKR033C 426 nt2.79□□□□□ -1.96
RAD3P06839 YML047W-AYML047W-A 366 nt2.79□□□□□ -1.96
RAD3P06839 AAR2YBL074C 1068 nt2.79□□□□□ -1.96
RAD3P06839 MUM2YBR057C 1101 nt2.79□□□□□ -1.96
RAD3P06839 APD1YBR151W 951 nt2.79□□□□□ -1.96
RAD3P06839 MLH1YMR167W 2310 nt2.79□□□□□ -1.96
RAD3P06839 TAF2YCR042C 4224 nt2.79□□□□□ -1.96
RAD3P06839 CLN2YPL256C 1638 nt2.79□□□□□ -1.96
RAD3P06839 VPS9YML097C 1356 nt2.78□□□□□ -1.96
RAD3P06839 YDL050CYDL050C 372 nt2.78□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 74.4 ms