Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 MIR5787-201ENST00000611784 55 ntBASIC18.45■□□□□ 0.54
CDH20Q9HBT6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CDH20Q9HBT6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CDH20Q9HBT6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 KRT87P-202ENST00000534226 1464 ntBASIC18.43■□□□□ 0.54
CDH20Q9HBT6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CDH20Q9HBT6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4L2-201ENST00000561772 1275 ntBASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4L6-201ENST00000626483 1275 ntBASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4L1-201ENST00000627662 1275 ntBASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4L8-201ENST00000629013 1275 ntBASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4L3-201ENST00000630187 1275 ntBASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4L7-201ENST00000630678 1275 ntBASIC18.42■□□□□ 0.54
CDH20Q9HBT6 DUX4L5-201ENST00000630834 1275 ntBASIC18.42■□□□□ 0.54
CDH20Q9HBT6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.42■□□□□ 0.54
CDH20Q9HBT6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 AC026471.6-201ENST00000622954 1905 ntBASIC18.41■□□□□ 0.54
CDH20Q9HBT6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 AC003102.1-202ENST00000563394 1796 ntBASIC18.41■□□□□ 0.54
CDH20Q9HBT6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 AC010542.4-201ENST00000563151 1910 ntBASIC18.41■□□□□ 0.54
CDH20Q9HBT6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDH20Q9HBT6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDH20Q9HBT6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms