Protein–RNA interactions for Protein: O00571

DDX3X, ATP-dependent RNA helicase DDX3X, humanhuman

Known RBP eCLIP

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3XO00571 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.756e-6■□□□□ 8.9
DDX3XO00571 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.44■■□□□ 1.824e-14■□□□□ 8.9
DDX3XO00571 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.43■■□□□ 1.824e-14■□□□□ 8.9
DDX3XO00571 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.223e-40■□□□□ 8.9
DDX3XO00571 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.414e-14■□□□□ 8.9
DDX3XO00571 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.023e-40■□□□□ 8.9
DDX3XO00571 RBM25-202ENST00000525161 541 ntTSL 412.16□□□□□ -0.464e-14■□□□□ 8.9
DDX3XO00571 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.873e-40■□□□□ 8.9
DDX3XO00571 KMT5B-211ENST00000458496 556 ntTSL 427.06■■□□□ 1.922e-7■□□□□ 8.9
DDX3XO00571 KMT5B-210ENST00000453170 594 ntTSL 525.77■■□□□ 1.722e-7■□□□□ 8.9
DDX3XO00571 KMT5B-207ENST00000427752 2475 ntTSL 224.55■■□□□ 1.522e-7■□□□□ 8.9
DDX3XO00571 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.63■■□□□ 1.052e-7■□□□□ 8.9
DDX3XO00571 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.63■□□□□ 0.892e-7■□□□□ 8.9
DDX3XO00571 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.89■□□□□ 0.772e-7■□□□□ 8.9
DDX3XO00571 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.762e-7■□□□□ 8.9
DDX3XO00571 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.42■□□□□ 0.542e-7■□□□□ 8.9
DDX3XO00571 KMT5B-208ENST00000434573 585 ntTSL 416.9■□□□□ 0.32e-7■□□□□ 8.9
DDX3XO00571 KMT5B-212ENST00000466295 638 ntTSL 214.61□□□□□ -0.072e-7■□□□□ 8.9
DDX3XO00571 KMT5B-209ENST00000441488 2816 ntTSL 1 (best)9.68□□□□□ -0.862e-7■□□□□ 8.9
DDX3XO00571 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.462e-7■□□□□ 8.9
DDX3XO00571 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.92■□□□□ 0.942e-8■□□□□ 8.9
DDX3XO00571 HSD17B10-205ENST00000495986 666 ntTSL 520.39■□□□□ 0.852e-8■□□□□ 8.9
DDX3XO00571 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.542e-8■□□□□ 8.9
DDX3XO00571 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.43■□□□□ 0.222e-8■□□□□ 8.9
DDX3XO00571 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.3■□□□□ 0.25e-9■□□□□ 8.9
DDX3XO00571 PRPF38B-204ENST00000467302 2043 ntTSL 1 (best)16.02■□□□□ 0.165e-9■□□□□ 8.9
DDX3XO00571 PRPF38B-201ENST00000370021 3728 ntTSL 1 (best) BASIC11.19□□□□□ -0.625e-9■□□□□ 8.9
DDX3XO00571 PRPF38B-203ENST00000370025 3693 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.75e-9■□□□□ 8.9
DDX3XO00571 TBC1D8-204ENST00000463469 561 ntTSL 415.96■□□□□ 0.151e-17■□□□□ 8.9
DDX3XO00571 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.84■□□□□ 0.131e-17■□□□□ 8.9
DDX3XO00571 TBC1D8-201ENST00000376840 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.251e-17■□□□□ 8.9
DDX3XO00571 CFI-207ENST00000618244 1345 ntTSL 5 BASIC8.44□□□□□ -1.062e-12■□□□□ 8.9
DDX3XO00571 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.162e-12■□□□□ 8.9
DDX3XO00571 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.222e-12■□□□□ 8.9
DDX3XO00571 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.91□□□□□ -1.32e-12■□□□□ 8.9
DDX3XO00571 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.552e-12■□□□□ 8.9
DDX3XO00571 CYP4F12-205ENST00000518629 1915 ntTSL 217.27■□□□□ 0.353e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-217ENST00000551607 324 ntTSL 517.21■□□□□ 0.353e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-210ENST00000548237 630 ntTSL 414.35□□□□□ -0.113e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.173e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-214ENST00000550264 550 ntTSL 213.78□□□□□ -0.23e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.243e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-212ENST00000548501 598 ntTSL 312.76□□□□□ -0.373e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-202ENST00000430608 1303 ntTSL 212.44□□□□□ -0.423e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-207ENST00000546792 686 ntTSL 312.04□□□□□ -0.483e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-204ENST00000517734 2860 ntTSL 211.93□□□□□ -0.53e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-209ENST00000547471 573 ntTSL 411.7□□□□□ -0.543e-7■□□□□ 8.9
DDX3XO00571 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.623e-12■□□□□ 8.9
DDX3XO00571 CYP4F12-213ENST00000549622 573 ntTSL 410.8□□□□□ -0.683e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-208ENST00000547332 593 ntTSL 49.7□□□□□ -0.863e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-203ENST00000451750 1011 ntTSL 28.94□□□□□ -0.983e-7■□□□□ 8.9
DDX3XO00571 CYP4F12-211ENST00000548435 567 ntTSL 48.46□□□□□ -1.063e-7■□□□□ 8.9
DDX3XO00571 ACTB-211ENST00000480301 657 ntTSL 1 (best)21.65■■□□□ 1.061e-323■□□□□ 8.9
DDX3XO00571 ACTB-210ENST00000477812 820 ntTSL 221.02■□□□□ 0.961e-323■□□□□ 8.9
DDX3XO00571 ACTB-212ENST00000484841 1032 ntTSL 520.27■□□□□ 0.841e-323■□□□□ 8.9
DDX3XO00571 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.691e-323■□□□□ 8.9
DDX3XO00571 ACTB-207ENST00000462494 2245 ntTSL 518.47■□□□□ 0.551e-323■□□□□ 8.9
DDX3XO00571 ACTB-204ENST00000425660 1845 ntTSL 1 (best)16.4■□□□□ 0.221e-323■□□□□ 8.9
DDX3XO00571 ACTB-206ENST00000443528 569 ntTSL 416.29■□□□□ 0.21e-323■□□□□ 8.9
DDX3XO00571 ACTB-205ENST00000432588 568 ntTSL 416.22■□□□□ 0.191e-323■□□□□ 8.9
DDX3XO00571 ACTB-202ENST00000414620 561 ntTSL 415.71■□□□□ 0.111e-323■□□□□ 8.9
DDX3XO00571 ACTB-209ENST00000473257 556 ntTSL 311.17□□□□□ -0.621e-323■□□□□ 8.9
DDX3XO00571 EIF2A-214ENST00000487799 1913 ntTSL 2 BASIC12.86□□□□□ -0.353e-8■□□□□ 8.9
DDX3XO00571 EIF2A-209ENST00000473499 634 ntTSL 211.64□□□□□ -0.553e-8■□□□□ 8.9
DDX3XO00571 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.643e-8■□□□□ 8.9
DDX3XO00571 EIF2A-205ENST00000463863 565 ntTSL 210.87□□□□□ -0.673e-8■□□□□ 8.9
DDX3XO00571 EIF2A-204ENST00000462221 817 ntTSL 58.05□□□□□ -1.123e-8■□□□□ 8.9
DDX3XO00571 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.89□□□□□ -1.153e-8■□□□□ 8.9
DDX3XO00571 EIF2A-216ENST00000494558 710 ntTSL 57.7□□□□□ -1.183e-8■□□□□ 8.9
DDX3XO00571 EIF2A-212ENST00000482093 725 ntTSL 57.21□□□□□ -1.263e-8■□□□□ 8.9
DDX3XO00571 EIF2A-210ENST00000474505 1010 ntTSL 26.31□□□□□ -1.43e-8■□□□□ 8.9
DDX3XO00571 EIF2A-215ENST00000490505 568 ntTSL 54.66□□□□□ -1.663e-8■□□□□ 8.9
DDX3XO00571 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.683e-8■□□□□ 8.9
DDX3XO00571 EIF2A-207ENST00000469331 553 ntTSL 24.46□□□□□ -1.73e-8■□□□□ 8.9
DDX3XO00571 FASN-207ENST00000635197 627 ntTSL 316.01■□□□□ 0.153e-12■□□□□ 8.9
DDX3XO00571 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.223e-12■□□□□ 8.9
DDX3XO00571 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.243e-12■□□□□ 8.9
DDX3XO00571 FASN-213ENST00000637693 100 ntTSL 510.13□□□□□ -0.793e-12■□□□□ 8.9
DDX3XO00571 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC7.53□□□□□ -1.23e-12■□□□□ 8.9
DDX3XO00571 PRKCQ-AS1-212ENST00000613651 850 ntTSL 26.39□□□□□ -1.397e-10■□□□□ 8.9
DDX3XO00571 MCRIP2-210ENST00000620462 1594 ntTSL 520.26■□□□□ 0.831e-9■□□□□ 8.9
DDX3XO00571 MCRIP2-204ENST00000575894 1728 nt19.79■□□□□ 0.761e-9■□□□□ 8.9
DDX3XO00571 MCRIP2-206ENST00000615744 1379 ntTSL 319.44■□□□□ 0.71e-9■□□□□ 8.9
DDX3XO00571 MCRIP2-209ENST00000619674 2306 ntTSL 219.2■□□□□ 0.661e-9■□□□□ 8.9
DDX3XO00571 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.04■■□□□ 1.65e-8■□□□□ 8.8
DDX3XO00571 PPP4R4-204ENST00000555690 680 ntTSL 324.51■■□□□ 1.515e-8■□□□□ 8.8
DDX3XO00571 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.495e-8■□□□□ 8.8
DDX3XO00571 PEX10-203ENST00000502666 653 ntTSL 323.86■■□□□ 1.415e-8■□□□□ 8.8
DDX3XO00571 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.315e-8■□□□□ 8.8
DDX3XO00571 PEX10-206ENST00000510434 907 ntTSL 322.54■■□□□ 1.25e-8■□□□□ 8.8
DDX3XO00571 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.195e-8■□□□□ 8.8
DDX3XO00571 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.185e-8■□□□□ 8.8
DDX3XO00571 GYG2-208ENST00000520904 624 ntTSL 322.39■■□□□ 1.175e-8■□□□□ 8.8
DDX3XO00571 PEX10-207ENST00000514502 548 ntTSL 422.38■■□□□ 1.175e-8■□□□□ 8.8
DDX3XO00571 PEX10-208ENST00000515760 603 ntTSL 420.81■□□□□ 0.925e-8■□□□□ 8.8
DDX3XO00571 RSF1-202ENST00000440064 604 ntTSL 519.93■□□□□ 0.785e-8■□□□□ 8.8
DDX3XO00571 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.59■□□□□ 0.735e-8■□□□□ 8.8
DDX3XO00571 PCED1A-204ENST00000448755 1170 ntTSL 319.08■□□□□ 0.645e-8■□□□□ 8.8
DDX3XO00571 TTC7A-206ENST00000441914 2418 ntTSL 1 (best)18.82■□□□□ 0.65e-8■□□□□ 8.8
DDX3XO00571 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.5■□□□□ 0.555e-8■□□□□ 8.8
Retrieved 100 of 47,714 protein–RNA pairs in 3579.2 ms