Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 CAF120YNL278W 3183 nt2.33□□□□□ -2.04
SHH3Q04487 ILS1YBL076C 3219 nt2.33□□□□□ -2.04
SHH3Q04487 RTN1YDR233C 888 nt2.33□□□□□ -2.04
SHH3Q04487 NKP1YDR383C 717 nt2.33□□□□□ -2.04
SHH3Q04487 YDR491CYDR491C 492 nt2.33□□□□□ -2.04
SHH3Q04487 SPT2YER161C 1002 nt2.33□□□□□ -2.04
SHH3Q04487 YGR026WYGR026W 837 nt2.33□□□□□ -2.04
SHH3Q04487 SDS3YIL084C 984 nt2.33□□□□□ -2.04
SHH3Q04487 YIL089WYIL089W 618 nt2.33□□□□□ -2.04
SHH3Q04487 SWD2YKL018W 990 nt2.33□□□□□ -2.04
SHH3Q04487 TDA8YAL064C-A 381 nt2.33□□□□□ -2.04
SHH3Q04487 REC102YLR329W 795 nt2.33□□□□□ -2.04
SHH3Q04487 YMR194C-AYMR194C-A 225 nt2.33□□□□□ -2.04
SHH3Q04487 ATP11YNL315C 957 nt2.33□□□□□ -2.04
SHH3Q04487 RFM1YOR279C 933 nt2.33□□□□□ -2.04
SHH3Q04487 MET16YPR167C 786 nt2.33□□□□□ -2.04
SHH3Q04487 GYP7YDL234C 2241 nt2.33□□□□□ -2.04
SHH3Q04487 ACA1YER045C 1470 nt2.33□□□□□ -2.04
SHH3Q04487 ROG1YGL144C 2058 nt2.32□□□□□ -2.04
SHH3Q04487 RIF1YBR275C 5751 nt2.32□□□□□ -2.04
SHH3Q04487 MRH1YDR033W 963 nt2.32□□□□□ -2.04
SHH3Q04487 MMS21YEL019C 804 nt2.32□□□□□ -2.04
SHH3Q04487 ATG27YJL178C 816 nt2.32□□□□□ -2.04
SHH3Q04487 YJR056CYJR056C 711 nt2.32□□□□□ -2.04
SHH3Q04487 GTT2YLL060C 702 nt2.32□□□□□ -2.04
SHH3Q04487 PFK27YOL136C 1194 nt2.32□□□□□ -2.04
SHH3Q04487 HNT3YOR258W 654 nt2.32□□□□□ -2.04
SHH3Q04487 YPR050CYPR050C 414 nt2.32□□□□□ -2.04
SHH3Q04487 YPR053CYPR053C 456 nt2.32□□□□□ -2.04
SHH3Q04487 PST1YDR055W 1335 nt2.32□□□□□ -2.04
SHH3Q04487 BNR1YIL159W 4128 nt2.32□□□□□ -2.04
SHH3Q04487 EBS1YDR206W 2655 nt2.32□□□□□ -2.04
SHH3Q04487 SPP382YLR424W 2127 nt2.32□□□□□ -2.04
SHH3Q04487 MET5YJR137C 4329 nt2.31□□□□□ -2.04
SHH3Q04487 CIN1YOR349W 3045 nt2.31□□□□□ -2.04
SHH3Q04487 CTM1YHR109W 1758 nt2.31□□□□□ -2.04
SHH3Q04487 YHR069C-AYHR069C-A 363 nt2.31□□□□□ -2.04
SHH3Q04487 DID4YKL002W 699 nt2.31□□□□□ -2.04
SHH3Q04487 YKL222CYKL222C 2118 nt2.31□□□□□ -2.04
SHH3Q04487 YOL050CYOL050C 321 nt2.31□□□□□ -2.04
SHH3Q04487 TLC1TLC1 1301 nt2.31□□□□□ -2.04
SHH3Q04487 VAC14YLR386W 2643 nt2.31□□□□□ -2.04
SHH3Q04487 YPK3YBR028C 1578 nt2.31□□□□□ -2.04
SHH3Q04487 AEP3YPL005W 1821 nt2.31□□□□□ -2.04
SHH3Q04487 VAS1YGR094W 3315 nt2.3□□□□□ -2.04
SHH3Q04487 VMA5YKL080W 1179 nt2.3□□□□□ -2.04
SHH3Q04487 SPS4YOR313C 1017 nt2.3□□□□□ -2.04
SHH3Q04487 RPL33AYPL143W 324 nt2.3□□□□□ -2.04
SHH3Q04487 PHO88YBR106W 567 nt2.3□□□□□ -2.04
SHH3Q04487 PRP8YHR165C 7242 nt2.3□□□□□ -2.04
SHH3Q04487 PHO81YGR233C 3537 nt2.29□□□□□ -2.04
SHH3Q04487 YKR078WYKR078W 1758 nt2.29□□□□□ -2.04
SHH3Q04487 HRD1YOL013C 1656 nt2.29□□□□□ -2.04
SHH3Q04487 STE24YJR117W 1362 nt2.29□□□□□ -2.04
SHH3Q04487 GRX2YDR513W 432 nt2.29□□□□□ -2.04
SHH3Q04487 YER079C-AYER079C-A 339 nt2.29□□□□□ -2.04
SHH3Q04487 SUP56tL(CAA)A 82 nt2.29□□□□□ -2.04
SHH3Q04487 SUP53tL(CAA)C 82 nt2.29□□□□□ -2.04
SHH3Q04487 tL(CAA)DtL(CAA)D 82 nt2.29□□□□□ -2.04
SHH3Q04487 tL(CAA)G1tL(CAA)G1 82 nt2.29□□□□□ -2.04
SHH3Q04487 SUP54tL(CAA)G2 82 nt2.29□□□□□ -2.04
SHH3Q04487 tL(CAA)G3tL(CAA)G3 82 nt2.29□□□□□ -2.04
SHH3Q04487 tL(CAA)KtL(CAA)K 82 nt2.29□□□□□ -2.04
SHH3Q04487 tL(CAA)LtL(CAA)L 82 nt2.29□□□□□ -2.04
SHH3Q04487 tL(CAA)MtL(CAA)M 82 nt2.29□□□□□ -2.04
SHH3Q04487 tL(CAA)NtL(CAA)N 82 nt2.29□□□□□ -2.04
SHH3Q04487 CGR1YGL029W 363 nt2.29□□□□□ -2.04
SHH3Q04487 SPO16YHR153C 597 nt2.29□□□□□ -2.04
SHH3Q04487 YIL174WYIL174W 228 nt2.29□□□□□ -2.04
SHH3Q04487 YJL222W-AYJL222W-A 228 nt2.29□□□□□ -2.04
SHH3Q04487 YKR011CYKR011C 1062 nt2.29□□□□□ -2.04
SHH3Q04487 YKR033CYKR033C 426 nt2.29□□□□□ -2.04
SHH3Q04487 SMA2YML066C 1110 nt2.29□□□□□ -2.04
SHH3Q04487 MRPL16YBL038W 699 nt2.29□□□□□ -2.04
SHH3Q04487 AAH1YNL141W 1044 nt2.29□□□□□ -2.04
SHH3Q04487 RSM19YNR037C 276 nt2.29□□□□□ -2.04
SHH3Q04487 MCA1YOR197W 1299 nt2.29□□□□□ -2.04
SHH3Q04487 CYR1YJL005W 6081 nt2.29□□□□□ -2.04
SHH3Q04487 MIP6YHR015W 1980 nt2.29□□□□□ -2.04
SHH3Q04487 TDA1YMR291W 1761 nt2.28□□□□□ -2.04
SHH3Q04487 STE23YLR389C 3084 nt2.28□□□□□ -2.04
SHH3Q04487 YCR045W-AYCR045W-A 351 nt2.28□□□□□ -2.04
SHH3Q04487 PPH3YDR075W 927 nt2.28□□□□□ -2.04
SHH3Q04487 YDR161WYDR161W 1164 nt2.28□□□□□ -2.04
SHH3Q04487 BSC2YDR275W 708 nt2.28□□□□□ -2.04
SHH3Q04487 SMT3YDR510W 306 nt2.28□□□□□ -2.04
SHH3Q04487 GPP2YER062C 753 nt2.28□□□□□ -2.04
SHH3Q04487 THO1YER063W 657 nt2.28□□□□□ -2.04
SHH3Q04487 PEF1YGR058W 1008 nt2.28□□□□□ -2.04
SHH3Q04487 YGR107WYGR107W 450 nt2.28□□□□□ -2.04
SHH3Q04487 ENV10YLR065C 546 nt2.28□□□□□ -2.04
SHH3Q04487 YBL094CYBL094C 333 nt2.28□□□□□ -2.04
SHH3Q04487 YOR263CYOR263C 408 nt2.28□□□□□ -2.04
SHH3Q04487 YPR027CYPR027C 834 nt2.28□□□□□ -2.04
SHH3Q04487 YBR085C-AYBR085C-A 258 nt2.28□□□□□ -2.04
SHH3Q04487 IKI3YLR384C 4050 nt2.28□□□□□ -2.04
SHH3Q04487 SRO77YBL106C 3033 nt2.28□□□□□ -2.05
SHH3Q04487 PBI1YPL272C 1554 nt2.27□□□□□ -2.05
SHH3Q04487 PBS2YJL128C 2007 nt2.27□□□□□ -2.05
SHH3Q04487 UBP15YMR304W 3693 nt2.27□□□□□ -2.05
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms