Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 OR7E47P-201ENST00000546390 1422 ntBASIC27.25■■□□□ 1.95
COL15A1P39059 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL15A1P39059 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL15A1P39059 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.25■■□□□ 1.95
COL15A1P39059 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL15A1P39059 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
COL15A1P39059 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL15A1P39059 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC27.25■■□□□ 1.95
COL15A1P39059 LINC00526-201ENST00000581067 1875 ntBASIC27.25■■□□□ 1.95
COL15A1P39059 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL15A1P39059 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL15A1P39059 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
COL15A1P39059 AL034346.1-201ENST00000568244 1277 ntBASIC27.24■■□□□ 1.95
COL15A1P39059 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
COL15A1P39059 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
COL15A1P39059 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL15A1P39059 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.24■■□□□ 1.95
COL15A1P39059 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL15A1P39059 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL15A1P39059 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
COL15A1P39059 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
COL15A1P39059 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
COL15A1P39059 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.24■■□□□ 1.95
COL15A1P39059 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC27.24■■□□□ 1.95
COL15A1P39059 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC27.24■■□□□ 1.95
COL15A1P39059 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL15A1P39059 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.23■■□□□ 1.95
COL15A1P39059 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL15A1P39059 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.23■■□□□ 1.95
COL15A1P39059 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
COL15A1P39059 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.23■■□□□ 1.95
COL15A1P39059 MIR4758-201ENST00000577688 71 ntBASIC27.22■■□□□ 1.95
COL15A1P39059 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL15A1P39059 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL15A1P39059 MKRN4P-201ENST00000444706 1521 ntBASIC27.22■■□□□ 1.95
COL15A1P39059 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL15A1P39059 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL15A1P39059 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL15A1P39059 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
COL15A1P39059 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.22■■□□□ 1.95
COL15A1P39059 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL15A1P39059 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC27.22■■□□□ 1.95
COL15A1P39059 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.22■■□□□ 1.95
COL15A1P39059 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
COL15A1P39059 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.22■■□□□ 1.95
COL15A1P39059 MIPEPP3-201ENST00000412105 444 ntBASIC27.22■■□□□ 1.95
COL15A1P39059 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC27.22■■□□□ 1.95
COL15A1P39059 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.22■■□□□ 1.95
COL15A1P39059 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL15A1P39059 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL15A1P39059 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL15A1P39059 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
COL15A1P39059 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL15A1P39059 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
COL15A1P39059 BET1L-204ENST00000410108 637 ntTSL 3 BASIC27.21■■□□□ 1.95
COL15A1P39059 POU5F1P3-201ENST00000428824 1078 ntBASIC27.21■■□□□ 1.95
COL15A1P39059 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL15A1P39059 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.21■■□□□ 1.95
COL15A1P39059 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.21■■□□□ 1.95
COL15A1P39059 AC008687.6-201ENST00000596318 630 ntBASIC27.21■■□□□ 1.95
COL15A1P39059 AC053503.5-201ENST00000601508 636 ntBASIC27.21■■□□□ 1.95
COL15A1P39059 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
COL15A1P39059 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC27.21■■□□□ 1.95
COL15A1P39059 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.21■■□□□ 1.95
COL15A1P39059 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
COL15A1P39059 AC087742.1-201ENST00000575880 1738 ntBASIC27.2■■□□□ 1.95
COL15A1P39059 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
COL15A1P39059 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
COL15A1P39059 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC27.2■■□□□ 1.94
COL15A1P39059 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.2■■□□□ 1.94
COL15A1P39059 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.2■■□□□ 1.94
COL15A1P39059 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC27.2■■□□□ 1.94
COL15A1P39059 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL15A1P39059 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL15A1P39059 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL15A1P39059 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.19■■□□□ 1.94
COL15A1P39059 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL15A1P39059 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
COL15A1P39059 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
COL15A1P39059 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.19■■□□□ 1.94
COL15A1P39059 AC093787.1-201ENST00000450396 207 ntBASIC27.19■■□□□ 1.94
COL15A1P39059 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC27.19■■□□□ 1.94
COL15A1P39059 RNA5SP413-201ENST00000516373 109 ntBASIC27.19■■□□□ 1.94
COL15A1P39059 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC27.19■■□□□ 1.94
COL15A1P39059 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL15A1P39059 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
COL15A1P39059 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
COL15A1P39059 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.18■■□□□ 1.94
COL15A1P39059 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL15A1P39059 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
COL15A1P39059 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.18■■□□□ 1.94
COL15A1P39059 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC27.18■■□□□ 1.94
COL15A1P39059 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL15A1P39059 AC093827.2-201ENST00000512654 315 ntBASIC27.18■■□□□ 1.94
COL15A1P39059 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.18■■□□□ 1.94
COL15A1P39059 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC27.18■■□□□ 1.94
COL15A1P39059 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
COL15A1P39059 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
COL15A1P39059 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms