Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.57■■□□□ 1.36
COL1A2P08123 AC010536.3-201ENST00000620306 533 ntBASIC23.57■■□□□ 1.36
COL1A2P08123 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.57■■□□□ 1.36
COL1A2P08123 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A2P08123 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL1A2P08123 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
COL1A2P08123 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.56■■□□□ 1.36
COL1A2P08123 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL1A2P08123 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.56■■□□□ 1.36
COL1A2P08123 AC104771.1-201ENST00000603335 964 ntBASIC23.56■■□□□ 1.36
COL1A2P08123 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
COL1A2P08123 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
COL1A2P08123 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
COL1A2P08123 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.56■■□□□ 1.36
COL1A2P08123 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC23.56■■□□□ 1.36
COL1A2P08123 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL1A2P08123 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL1A2P08123 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.56■■□□□ 1.36
COL1A2P08123 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.55■■□□□ 1.36
COL1A2P08123 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL1A2P08123 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL1A2P08123 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC23.55■■□□□ 1.36
COL1A2P08123 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC23.55■■□□□ 1.36
COL1A2P08123 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL1A2P08123 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL1A2P08123 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.54■■□□□ 1.36
COL1A2P08123 CNN2P6-201ENST00000439038 900 ntBASIC23.54■■□□□ 1.36
COL1A2P08123 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.54■■□□□ 1.36
COL1A2P08123 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC23.54■■□□□ 1.36
COL1A2P08123 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.54■■□□□ 1.36
COL1A2P08123 AC008175.2-201ENST00000612840 297 ntBASIC23.54■■□□□ 1.36
COL1A2P08123 AL050303.2-201ENST00000619798 666 ntBASIC23.54■■□□□ 1.36
COL1A2P08123 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 AC092053.2-201ENST00000640557 1818 ntBASIC23.54■■□□□ 1.36
COL1A2P08123 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
COL1A2P08123 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL1A2P08123 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL1A2P08123 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.53■■□□□ 1.36
COL1A2P08123 AC005181.1-201ENST00000604782 1256 ntBASIC23.53■■□□□ 1.36
COL1A2P08123 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC23.53■■□□□ 1.36
COL1A2P08123 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.53■■□□□ 1.36
COL1A2P08123 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC23.53■■□□□ 1.36
COL1A2P08123 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC23.53■■□□□ 1.36
COL1A2P08123 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.53■■□□□ 1.36
COL1A2P08123 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL1A2P08123 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.53■■□□□ 1.36
COL1A2P08123 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL1A2P08123 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL1A2P08123 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL1A2P08123 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.53■■□□□ 1.36
COL1A2P08123 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
COL1A2P08123 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.53■■□□□ 1.36
COL1A2P08123 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL1A2P08123 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL1A2P08123 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 POU5F1P4-201ENST00000413175 1085 ntBASIC23.52■■□□□ 1.36
COL1A2P08123 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
COL1A2P08123 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 AL109923.1-201ENST00000618799 583 ntBASIC23.52■■□□□ 1.36
COL1A2P08123 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.52■■□□□ 1.36
COL1A2P08123 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.52■■□□□ 1.36
COL1A2P08123 C1orf229-201ENST00000623686 2258 ntBASIC23.52■■□□□ 1.36
COL1A2P08123 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
COL1A2P08123 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL1A2P08123 SLC7A5P2-201ENST00000553010 536 ntBASIC23.52■■□□□ 1.36
COL1A2P08123 AC120498.10-201ENST00000621827 505 ntBASIC23.52■■□□□ 1.36
COL1A2P08123 AC013268.1-206ENST00000638368 961 ntBASIC23.52■■□□□ 1.36
COL1A2P08123 AC112229.1-201ENST00000639295 961 ntBASIC23.52■■□□□ 1.36
COL1A2P08123 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A2P08123 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
COL1A2P08123 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A2P08123 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A2P08123 GPX1P1-201ENST00000388829 606 ntBASIC23.51■■□□□ 1.35
COL1A2P08123 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.51■■□□□ 1.35
COL1A2P08123 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.51■■□□□ 1.35
COL1A2P08123 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.51■■□□□ 1.35
COL1A2P08123 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.51■■□□□ 1.35
COL1A2P08123 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL1A2P08123 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
COL1A2P08123 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A2P08123 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.5■■□□□ 1.35
COL1A2P08123 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.5■■□□□ 1.35
COL1A2P08123 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A2P08123 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.5■■□□□ 1.35
COL1A2P08123 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL1A2P08123 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms