Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPNS1P04632 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.4■■□□□ 1.02
CAPNS1P04632 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CAPNS1P04632 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.4■■□□□ 1.02
CAPNS1P04632 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CAPNS1P04632 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.4■■□□□ 1.02
CAPNS1P04632 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.4■■□□□ 1.02
CAPNS1P04632 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CAPNS1P04632 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CAPNS1P04632 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CAPNS1P04632 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CAPNS1P04632 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPNS1P04632 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
CAPNS1P04632 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CAPNS1P04632 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPNS1P04632 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
CAPNS1P04632 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CAPNS1P04632 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CAPNS1P04632 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.39■■□□□ 1.01
CAPNS1P04632 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.39■■□□□ 1.01
CAPNS1P04632 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.39■■□□□ 1.01
CAPNS1P04632 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 AC137761.2-201ENST00000561729 223 ntBASIC21.39■■□□□ 1.01
CAPNS1P04632 AC145350.3-201ENST00000569033 163 ntBASIC21.39■■□□□ 1.01
CAPNS1P04632 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.39■■□□□ 1.01
CAPNS1P04632 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.39■■□□□ 1.01
CAPNS1P04632 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CAPNS1P04632 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CAPNS1P04632 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPNS1P04632 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPNS1P04632 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPNS1P04632 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CAPNS1P04632 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPNS1P04632 AC016769.1-201ENST00000409132 1010 ntBASIC21.38■■□□□ 1.01
CAPNS1P04632 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPNS1P04632 AC006970.2-201ENST00000450065 779 ntBASIC21.38■■□□□ 1.01
CAPNS1P04632 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPNS1P04632 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.38■■□□□ 1.01
CAPNS1P04632 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CAPNS1P04632 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.38■■□□□ 1.01
CAPNS1P04632 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPNS1P04632 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPNS1P04632 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CAPNS1P04632 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPNS1P04632 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
CAPNS1P04632 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPNS1P04632 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.37■■□□□ 1.01
CAPNS1P04632 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CAPNS1P04632 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CAPNS1P04632 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPNS1P04632 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CAPNS1P04632 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.37■■□□□ 1.01
CAPNS1P04632 AP005435.1-201ENST00000529293 1178 ntBASIC21.37■■□□□ 1.01
CAPNS1P04632 AC142086.2-201ENST00000569753 217 ntBASIC21.37■■□□□ 1.01
CAPNS1P04632 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.37■■□□□ 1.01
CAPNS1P04632 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPNS1P04632 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPNS1P04632 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CAPNS1P04632 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.37■■□□□ 1.01
CAPNS1P04632 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CAPNS1P04632 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CAPNS1P04632 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPNS1P04632 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CAPNS1P04632 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPNS1P04632 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPNS1P04632 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPNS1P04632 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPNS1P04632 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CAPNS1P04632 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.36■■□□□ 1.01
CAPNS1P04632 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
CAPNS1P04632 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CAPNS1P04632 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.35■■□□□ 1.01
CAPNS1P04632 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CAPNS1P04632 SLC25A24-204ENST00000569674 2357 ntBASIC21.35■■□□□ 1.01
CAPNS1P04632 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CAPNS1P04632 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.35■■□□□ 1.01
CAPNS1P04632 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.35■■□□□ 1.01
CAPNS1P04632 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CAPNS1P04632 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CAPNS1P04632 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.34■■□□□ 1.01
CAPNS1P04632 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CAPNS1P04632 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CAPNS1P04632 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.34■■□□□ 1.01
CAPNS1P04632 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms