Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.321e-11■■■■■ 55.8
DDX59Q5T1V6 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.66□□□□□ -0.542e-61■■■■■ 55.6
DDX59Q5T1V6 INTS11-212ENST00000462432 2863 ntTSL 1 (best)11.51□□□□□ -0.578e-7■■■■■ 55.2
DDX59Q5T1V6 INTS11-245ENST00000533916 405 ntTSL 210.3□□□□□ -0.768e-7■■■■■ 55.2
DDX59Q5T1V6 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.371e-8■■■■■ 55.2
DDX59Q5T1V6 RUBCN-204ENST00000415452 2665 ntTSL 1 (best)10.88□□□□□ -0.671e-8■■■■■ 55.2
DDX59Q5T1V6 RUBCN-201ENST00000273582 6955 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.891e-8■■■■■ 55.2
DDX59Q5T1V6 RUBCN-203ENST00000413360 3801 ntTSL 58.86□□□□□ -0.991e-8■■■■■ 55.2
DDX59Q5T1V6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.55e-8■■■■■ 55.1
DDX59Q5T1V6 KLHL23-206ENST00000498202 843 ntTSL 315.46■□□□□ 0.075e-8■■■■■ 55.1
DDX59Q5T1V6 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.45e-8■■■■■ 55.1
DDX59Q5T1V6 KLHL23-203ENST00000437875 895 ntTSL 35.72□□□□□ -1.495e-8■■■■■ 55.1
DDX59Q5T1V6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.73□□□□□ -1.815e-8■■■■■ 55.1
DDX59Q5T1V6 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC11.79□□□□□ -0.523e-18■■■■■ 55.1
DDX59Q5T1V6 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC11.51□□□□□ -0.573e-18■■■■■ 55.1
DDX59Q5T1V6 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.643e-18■■■■■ 55.1
DDX59Q5T1V6 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.99□□□□□ -1.453e-18■■■■■ 55.1
DDX59Q5T1V6 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.22□□□□□ -1.573e-18■■■■■ 55.1
DDX59Q5T1V6 CDC42BPA-209ENST00000448940 7355 ntTSL 1 (best)5.13□□□□□ -1.593e-18■■■■■ 55.1
DDX59Q5T1V6 ABCA2-221ENST00000492260 2062 ntTSL 518.31■□□□□ 0.521e-13■■■■■ 54.9
DDX59Q5T1V6 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.21e-13■■■■■ 54.9
DDX59Q5T1V6 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.211e-13■■■■■ 54.9
DDX59Q5T1V6 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.391e-13■■■■■ 54.9
DDX59Q5T1V6 ABCA2-218ENST00000487109 8031 ntTSL 1 (best)12.39□□□□□ -0.431e-13■■■■■ 54.9
DDX59Q5T1V6 ABCA2-208ENST00000459850 8073 ntTSL 1 (best)12.16□□□□□ -0.461e-13■■■■■ 54.9
DDX59Q5T1V6 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC12.13□□□□□ -0.471e-13■■■■■ 54.9
DDX59Q5T1V6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.62■□□□□ 0.571e-6■■■■■ 54.5
DDX59Q5T1V6 EPS8L2-217ENST00000530452 704 ntTSL 316.25■□□□□ 0.191e-6■■■■■ 54.5
DDX59Q5T1V6 INTS11-227ENST00000525603 738 ntTSL 312.89□□□□□ -0.352e-6■■■■■ 54.3
DDX59Q5T1V6 CLASP1-213ENST00000485112 869 ntTSL 520.75■□□□□ 0.913e-10■■■■■ 54.3
DDX59Q5T1V6 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC10.23□□□□□ -0.773e-10■■■■■ 54.3
DDX59Q5T1V6 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.963e-10■■■■■ 54.3
DDX59Q5T1V6 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC9□□□□□ -0.973e-10■■■■■ 54.3
DDX59Q5T1V6 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC8.79□□□□□ -13e-10■■■■■ 54.3
DDX59Q5T1V6 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.34□□□□□ -1.083e-10■■■■■ 54.3
DDX59Q5T1V6 LAMA5-202ENST00000370677 1674 ntTSL 218.65■□□□□ 0.583e-7■■■■■ 54
DDX59Q5T1V6 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.368e-9■■■■■ 54
DDX59Q5T1V6 AC141557.1-201ENST00000540982 400 ntBASIC-0.1□□□□□ -2.435e-7■■■■■ 53.9
DDX59Q5T1V6 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.423e-7■■■■■ 53.9
DDX59Q5T1V6 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.433e-7■■■■■ 53.9
DDX59Q5T1V6 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.73e-7■■■■■ 53.9
DDX59Q5T1V6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.23■■□□□ 1.637e-7■■■■■ 53.6
DDX59Q5T1V6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.277e-7■■■■■ 53.6
DDX59Q5T1V6 PPP1R37-206ENST00000544069 712 ntTSL 521.12■□□□□ 0.975e-11■■■■■ 53.2
DDX59Q5T1V6 PPP1R37-203ENST00000496125 555 ntTSL 315.68■□□□□ 0.15e-11■■■■■ 53.2
DDX59Q5T1V6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.025e-11■■■■■ 53.2
DDX59Q5T1V6 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.465e-11■■■■■ 53.2
DDX59Q5T1V6 SEC14L1-202ENST00000430767 5283 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.515e-11■■■■■ 53.2
DDX59Q5T1V6 SEC14L1-201ENST00000392476 2957 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.765e-11■■■■■ 53.2
DDX59Q5T1V6 SEC14L1-205ENST00000443798 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.785e-11■■■■■ 53.2
DDX59Q5T1V6 PPP1R37-207ENST00000544897 527 ntTSL 22.75□□□□□ -1.975e-11■■■■■ 53.2
DDX59Q5T1V6 OGFOD3-208ENST00000580445 1274 ntTSL 1 (best)19.2■□□□□ 0.662e-7■■■■■ 52.9
DDX59Q5T1V6 OGFOD3-203ENST00000577495 872 ntTSL 318.73■□□□□ 0.592e-7■■■■■ 52.9
DDX59Q5T1V6 OGFOD3-204ENST00000577606 598 ntTSL 418.4■□□□□ 0.542e-7■■■■■ 52.9
DDX59Q5T1V6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.53■□□□□ 0.42e-7■■■■■ 52.9
DDX59Q5T1V6 OGFOD3-212ENST00000583897 896 ntTSL 516.93■□□□□ 0.32e-7■■■■■ 52.9
DDX59Q5T1V6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.182e-7■■■■■ 52.9
DDX59Q5T1V6 ATP11A-209ENST00000466946 431 ntTSL 56.98□□□□□ -1.293e-7■■■■■ 52.7
DDX59Q5T1V6 VAV2-205ENST00000486113 523 ntTSL 211.4□□□□□ -0.583e-7■■■■■ 52.7
DDX59Q5T1V6 SRPK2-211ENST00000482862 329 ntTSL 519.64■□□□□ 0.731e-11■■■■■ 52.4
DDX59Q5T1V6 SRPK2-212ENST00000482897 715 ntTSL 519.21■□□□□ 0.671e-11■■■■■ 52.4
DDX59Q5T1V6 SRPK2-206ENST00000465112 568 ntTSL 312.95□□□□□ -0.341e-11■■■■■ 52.4
DDX59Q5T1V6 SRPK2-203ENST00000460391 666 ntTSL 212.41□□□□□ -0.421e-11■■■■■ 52.4
DDX59Q5T1V6 SRPK2-204ENST00000462282 505 ntTSL 311.05□□□□□ -0.641e-11■■■■■ 52.4
DDX59Q5T1V6 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.891e-11■■■■■ 52.4
DDX59Q5T1V6 LCN12-205ENST00000470501 1804 ntTSL 217.51■□□□□ 0.392e-9■■■■■ 52.1
DDX59Q5T1V6 LCN12-213ENST00000494713 524 ntTSL 214.38□□□□□ -0.112e-9■■■■■ 52.1
DDX59Q5T1V6 LCN12-204ENST00000466277 781 ntTSL 214.02□□□□□ -0.172e-9■■■■■ 52.1
DDX59Q5T1V6 LCN12-207ENST00000476751 536 ntTSL 213.84□□□□□ -0.192e-9■■■■■ 52.1
DDX59Q5T1V6 LCN12-206ENST00000471615 489 ntTSL 513.83□□□□□ -0.22e-9■■■■■ 52.1
DDX59Q5T1V6 LCN12-210ENST00000491316 629 ntTSL 313.56□□□□□ -0.242e-9■■■■■ 52.1
DDX59Q5T1V6 LCN12-201ENST00000371632 403 ntTSL 211.33□□□□□ -0.62e-9■■■■■ 52.1
DDX59Q5T1V6 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.822e-9■■■■■ 52.1
DDX59Q5T1V6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.77■□□□□ 0.765e-7■■■■■ 51.8
DDX59Q5T1V6 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.365e-7■■■■■ 51.8
DDX59Q5T1V6 EIPR1-203ENST00000406835 738 ntTSL 517.24■□□□□ 0.355e-7■■■■■ 51.8
DDX59Q5T1V6 EIPR1-204ENST00000435721 672 ntTSL 317.24■□□□□ 0.355e-7■■■■■ 51.8
DDX59Q5T1V6 EIPR1-205ENST00000441271 647 ntTSL 515.6■□□□□ 0.095e-7■■■■■ 51.8
DDX59Q5T1V6 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.59■□□□□ 0.095e-7■■■■■ 51.8
DDX59Q5T1V6 EIPR1-208ENST00000455162 847 ntTSL 59.84□□□□□ -0.835e-7■■■■■ 51.8
DDX59Q5T1V6 EIPR1-210ENST00000463662 757 ntTSL 38.32□□□□□ -1.085e-7■■■■■ 51.8
DDX59Q5T1V6 EXOC3L4-203ENST00000559661 665 ntTSL 516.12■□□□□ 0.175e-10■■■■■ 51.6
DDX59Q5T1V6 WNK2-208ENST00000453718 1937 ntTSL 515.77■□□□□ 0.121e-7■■■■■ 51.5
DDX59Q5T1V6 WNK2-214ENST00000474009 561 ntTSL 315.63■□□□□ 0.091e-7■■■■■ 51.5
DDX59Q5T1V6 WNK2-207ENST00000448251 3224 ntTSL 212.96□□□□□ -0.331e-7■■■■■ 51.5
DDX59Q5T1V6 WNK2-216ENST00000479696 532 ntTSL 36.95□□□□□ -1.31e-7■■■■■ 51.5
DDX59Q5T1V6 CHFR-214ENST00000536932 584 ntTSL 413.92□□□□□ -0.184e-7■■■■■ 51.4
DDX59Q5T1V6 ZNF605-201ENST00000331711 838 ntTSL 212.99□□□□□ -0.334e-7■■■■■ 51.4
DDX59Q5T1V6 ZNF605-203ENST00000381215 1143 ntTSL 1 (best)9.19□□□□□ -0.944e-7■■■■■ 51.4
DDX59Q5T1V6 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.094e-7■■■■■ 51.4
DDX59Q5T1V6 ZNF605-205ENST00000412621 541 ntTSL 46.26□□□□□ -1.414e-7■■■■■ 51.4
DDX59Q5T1V6 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.454e-7■■■■■ 51.4
DDX59Q5T1V6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.854e-7■■■■■ 51.3
DDX59Q5T1V6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.474e-7■■■■■ 51.3
DDX59Q5T1V6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.464e-7■■■■■ 51.3
DDX59Q5T1V6 ARID1B-201ENST00000319584 2199 ntTSL 212.3□□□□□ -0.444e-7■■■■■ 51.3
DDX59Q5T1V6 ARID1B-205ENST00000414678 6528 ntAPPRIS ALT2 TSL 59.04□□□□□ -0.964e-7■■■■■ 51.3
DDX59Q5T1V6 MARK4-203ENST00000587566 553 ntTSL 512.48□□□□□ -0.412e-9■■■■■ 51.2
DDX59Q5T1V6 MARK4-209ENST00000592762 683 ntTSL 522.27■■□□□ 1.162e-9■■■■■ 51.1
DDX59Q5T1V6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.43■□□□□ 0.382e-9■■■■■ 51.1
Retrieved 100 of 7,289 protein–RNA pairs in 442.5 ms