Protein–RNA interactions for Protein: O35516

Notch2, Neurogenic locus notch homolog protein 2, mousemouse

Predictions only

Length 2,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch2O35516 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Notch2O35516 Gm11599-201ENSMUST00000118720 878 ntBASIC20.78■□□□□ 0.92
Notch2O35516 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.78■□□□□ 0.92
Notch2O35516 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Notch2O35516 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Notch2O35516 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.74■□□□□ 0.91
Notch2O35516 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Notch2O35516 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.73■□□□□ 0.91
Notch2O35516 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Notch2O35516 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Notch2O35516 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Notch2O35516 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Notch2O35516 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Notch2O35516 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Notch2O35516 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Notch2O35516 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Notch2O35516 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Notch2O35516 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Notch2O35516 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.62■□□□□ 0.89
Notch2O35516 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Notch2O35516 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Notch2O35516 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Notch2O35516 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Notch2O35516 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch2O35516 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Notch2O35516 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.58■□□□□ 0.88
Notch2O35516 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Notch2O35516 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Notch2O35516 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.56■□□□□ 0.88
Notch2O35516 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.56■□□□□ 0.88
Notch2O35516 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.56■□□□□ 0.88
Notch2O35516 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Notch2O35516 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Notch2O35516 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Notch2O35516 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Notch2O35516 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Notch2O35516 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Notch2O35516 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Notch2O35516 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Notch2O35516 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Notch2O35516 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.52■□□□□ 0.88
Notch2O35516 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Notch2O35516 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Notch2O35516 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Notch2O35516 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Notch2O35516 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.47■□□□□ 0.87
Notch2O35516 Gm22567-201ENSMUST00000175542 342 ntBASIC20.47■□□□□ 0.87
Notch2O35516 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Notch2O35516 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Notch2O35516 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Notch2O35516 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Notch2O35516 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Notch2O35516 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.45■□□□□ 0.86
Notch2O35516 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Notch2O35516 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Notch2O35516 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Notch2O35516 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.43■□□□□ 0.86
Notch2O35516 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.43■□□□□ 0.86
Notch2O35516 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch2O35516 Gm43863-201ENSMUST00000203822 1192 ntBASIC20.42■□□□□ 0.86
Notch2O35516 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch2O35516 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Notch2O35516 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Notch2O35516 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Notch2O35516 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Notch2O35516 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Notch2O35516 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.38■□□□□ 0.85
Notch2O35516 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Notch2O35516 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Notch2O35516 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Notch2O35516 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Notch2O35516 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Notch2O35516 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.34■□□□□ 0.85
Notch2O35516 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Notch2O35516 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Notch2O35516 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Notch2O35516 Mipep-204ENSMUST00000225043 1548 ntBASIC20.32■□□□□ 0.84
Notch2O35516 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.31■□□□□ 0.84
Notch2O35516 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Notch2O35516 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Notch2O35516 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.3■□□□□ 0.84
Notch2O35516 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Notch2O35516 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Notch2O35516 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Notch2O35516 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Notch2O35516 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Notch2O35516 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.27■□□□□ 0.83
Notch2O35516 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.26■□□□□ 0.83
Notch2O35516 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Notch2O35516 Nkain2-201ENSMUST00000092602 558 ntBASIC20.26■□□□□ 0.83
Notch2O35516 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Notch2O35516 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Notch2O35516 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Notch2O35516 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms