Protein–RNA interactions for Protein: D3YXG0

Hmcn1, Hemicentin-1, mousemouse

Predictions only

Length 5,634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmcn1D3YXG0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
Hmcn1D3YXG0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmcn1D3YXG0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmcn1D3YXG0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Hmcn1D3YXG0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
Hmcn1D3YXG0 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Hmcn1D3YXG0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Hmcn1D3YXG0 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmcn1D3YXG0 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Hmcn1D3YXG0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmcn1D3YXG0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmcn1D3YXG0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmcn1D3YXG0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmcn1D3YXG0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Hmcn1D3YXG0 Gm22567-201ENSMUST00000175542 342 ntBASIC7.82□□□□□ -1.16
Hmcn1D3YXG0 Gm42809-201ENSMUST00000198429 1138 ntBASIC7.82□□□□□ -1.16
Hmcn1D3YXG0 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Hmcn1D3YXG0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Hmcn1D3YXG0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC7.82□□□□□ -1.16
Hmcn1D3YXG0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC7.82□□□□□ -1.16
Hmcn1D3YXG0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Hmcn1D3YXG0 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Hmcn1D3YXG0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hmcn1D3YXG0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Hmcn1D3YXG0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
Hmcn1D3YXG0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Hmcn1D3YXG0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC7.8□□□□□ -1.16
Hmcn1D3YXG0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
Hmcn1D3YXG0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmcn1D3YXG0 Gm43863-201ENSMUST00000203822 1192 ntBASIC7.79□□□□□ -1.16
Hmcn1D3YXG0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Hmcn1D3YXG0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Hmcn1D3YXG0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC7.77□□□□□ -1.16
Hmcn1D3YXG0 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmcn1D3YXG0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Hmcn1D3YXG0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Hmcn1D3YXG0 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Hmcn1D3YXG0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Hmcn1D3YXG0 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC7.76□□□□□ -1.17
Hmcn1D3YXG0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Hmcn1D3YXG0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Hmcn1D3YXG0 Zfp131-207ENSMUST00000224946 1783 ntBASIC7.76□□□□□ -1.17
Hmcn1D3YXG0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC7.75□□□□□ -1.17
Hmcn1D3YXG0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Hmcn1D3YXG0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Hmcn1D3YXG0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Hmcn1D3YXG0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC7.73□□□□□ -1.17
Hmcn1D3YXG0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hmcn1D3YXG0 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Hmcn1D3YXG0 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hmcn1D3YXG0 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hmcn1D3YXG0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hmcn1D3YXG0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Hmcn1D3YXG0 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Nkain2-201ENSMUST00000092602 558 ntBASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Hmcn1D3YXG0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
Hmcn1D3YXG0 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
Hmcn1D3YXG0 Mipep-204ENSMUST00000225043 1548 ntBASIC7.71□□□□□ -1.17
Hmcn1D3YXG0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC7.71□□□□□ -1.17
Hmcn1D3YXG0 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hmcn1D3YXG0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Hmcn1D3YXG0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Hmcn1D3YXG0 AC157572.2-201ENSMUST00000226970 908 ntBASIC7.71□□□□□ -1.18
Hmcn1D3YXG0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Hmcn1D3YXG0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Gm5297-201ENSMUST00000198555 1171 ntBASIC7.7□□□□□ -1.18
Hmcn1D3YXG0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Hmcn1D3YXG0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC7.69□□□□□ -1.18
Hmcn1D3YXG0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC7.69□□□□□ -1.18
Hmcn1D3YXG0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC7.68□□□□□ -1.18
Hmcn1D3YXG0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC7.68□□□□□ -1.18
Hmcn1D3YXG0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC7.68□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms